Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.306162	Lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	10		66094
Gene Ontology	cytoplasm | mRNA catabolism | protein heterodimerization activity
Human Homolog	LSM7[LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCCCTTCC (2) GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 30.9 0.0309 Cb medulloblastoma GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 34.6 0.0346 P8 GC+1d culture GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 18.2 0.0182 P8 GC+SHH+1d culture GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 31.6 0.0316 3T3 fibroblasts TGAGCAAAAA TGAGCATCTC 14 0.014 E15 cortex TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 14.7 0.0147 P1 cortex TGAGCAAAAA TGAGCATCTC 9 0.009 Hypothalamus GAGGCCATCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 23.5 0.0235 E12.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 35.7 0.0357 E14.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 32.7 0.0327 E16.5 retina GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 38.1 0.0381 E18.5 retina GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 49 0.049 P0.5 retina GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 27.6 0.0276 P2.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 49.3 0.0493 P4.5 retina GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 21.8 0.0218 P6.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 28.4 0.0284 P10.5 crx- retina GAGCCCTTCC (2) GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 16.9 0.0169 P10.5 crx+ retina GTCCCATCCA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 19.2 0.0192 Adult retinal GAGCCCTTCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 9.4 0.0094 ONL GAGCCCTTCC (2) GAGGCCATCC (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 19.1 0.0191