Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30929	9530001N24Rik	RIKEN cDNA 9530001N24 gene	4		77436
Mm.30929	Prdx1	peroxiredoxin 1	4	4 47.0 cM	18477
Gene Ontology	antioxidant activity | oxidoreductase activity | peroxidase activity | response to oxidative stress
Human Homolog	PRDX1[peroxiredoxin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACATTCCCT (2) ATGTGGTGTG (2) GAGGTGGTGG (4) TCTTTAGGTT (2) TGTACCATTA (3) TGTTTAAGCA (2) TTTGTCAGTG (2) 39.1 0.0391 Cb medulloblastoma ATGTGGTGTG (2) GATTACCATA (2) TGTACCATTA (3) 11.5 0.0115 P8 GC+1d culture ATGTGGTGTG (2) 24 0.024 P8 GC+SHH+1d culture ATGTGGTGTG (2) TCCCTGAAAA (2) TGTACCATTA (3) 34 0.034 3T3 fibroblasts ATGTGGTGTG (2) GAGGTGGTGG (4) 38.5 0.0385 E15 cortex GAGGTGGTGG (4) 4.9 0.0049 P1 cortex ATGTGGTGTG (2) 4.5 0.0045 Hypothalamus ATGTGGTGTG (2) TGTTTAAGCA (2) TTTGTCAGTG (2) 14.5 0.0145 E12.5 retina AACATTCCCT (2) ATGCGGTGTG (2) ATGTGGTGTG (2) GATTACCATA (2) TCTTTAGGTT (2) TGTACCATTA (3) 43.3 0.0433 E14.5 retina ATGTGGTGTG (2) TTTGTCAGTG (2) 10.9 0.0109 E16.5 retina AACATTCCCT (2) ATGTGGGTGT (2) ATGTGGTGTG (2) GATTACCATA (2) TCCCTGAAAA (2) TTTGTCAGTG (2) 32.5 0.0325 E18.5 retina ATGTGGTGTG (2) TGTACCATTA (3) TGTTTAAGCA (2) TTTGTCAGTG (2) 23.7 0.0237 P0.5 retina ATGCGGTGTG (2) ATGTGGTGTG (2) TGTTTAAGCA (2) 31.4 0.0314 P2.5 retina ATGTGGGTGT (2) ATGTGGTGTG (2) TCTTTAGGTT (2) 19.4 0.0194 P4.5 retina AACATTCCCT (2) ATGTGGGTGT (2) ATGTGGTGTG (2) 8 0.008 P6.5 retina AACATTCCTT (2) ATGTGGTGTG (2) TCCCTGAAAA (2) TCTTTAGGTT (2) 15 0.015 P10.5 crx- retina AACATTCCTT (2) ATGTGGTGTG (2) TGTACCATTA (3) 54 0.054 P10.5 crx+ retina ATGTGGTGTG (2) TCCCTGAAAA (2) TCTTTAGGTT (2) TGTACCATTA (3) 24.9 0.0249 Adult retinal ATGTGGTGTG (2) 3.7 0.0037 ONL ATGTGGTGTG (2) 1.9 0.0019