Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.309867	Ptk9	protein tyrosine kinase 9	15	15 F1	19230
Gene Ontology	actin binding | cytoskeleton | intracellular
Human Homolog	PTK9[PTK9 protein tyrosine kinase 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTTCAAAGA TCTTCTGTGG 16.3 0.0163 Cb medulloblastoma CACATAAGCA CACTTATAAA TAATTTTTCA TCTTCTGTGG 9.2 0.0092 P8 GC+1d culture CACATAAGCA GTTTCAAAGA TCTTCTGTGG TTCGAAAGCC 13.6 0.0136 P8 GC+SHH+1d culture CACTTATAAA CTCAGGAAGG (2) GTTTCAAAGA TCTTCTGTGG TTCGAAAGCC 23.5 0.0235 3T3 fibroblasts TCTTCTGTGG 3.5 0.0035 E15 cortex GTTTCAAAGA 4.9 0.0049 P1 cortex TCTTCTGTGG 4.5 0.0045 Hypothalamus ATTTTTATTT (3) CACATAAGCA CACTTATAAA GTATGAAATA GTTTCAAAGA TCTTCTGTGG 16.2 0.0162 E12.5 retina GTTTCAAAGA TAATTTTTCA TCTTCTGTGG TTCGAAAGCC 24.5 0.0245 E14.5 retina TCTTCTGTGG TTCGAAAGCC 12.8 0.0128 E16.5 retina TCTTCTGTGG 5.4 0.0054 E18.5 retina TCTTCTGTGG TTCGAAAGCC 10.9 0.0109 P0.5 retina GTTTCAAAGA TCTTCTGTGG 9.9 0.0099 P2.5 retina GTATGAAATA GTTTCAAAGA TCTTCTGTGG TTCGAAAGCC 26.4 0.0264 P4.5 retina GTTTCAAAGA TTCGAAAGCC 4 0.004 P6.5 retina ATTTTTATTT (3) CACATAAGCA CACTTATAAA TCTTCTGTGG TTCGAAAGCC 21.7 0.0217 P10.5 crx- retina CACATAAGCA CACTTATAAA GTATGAAATA GTTTCAAAGA TAATTTTTCA TCTTCTGTGG 24.3 0.0243 P10.5 crx+ retina CACATAAGCA CACTTATAAA CTCAGGAAGG (2) GTTTCAAAGA TCTTCTGTGG 23 0.023 Adult retinal CTCAGGAAGG (2) GTTTCAAAGA 3.8 0.0038 ONL ATTTTTATTT (3) CACATAAGCA CACTTATAAA TCTTCTGTGG TTCGAAAGCC 13.3 0.0133