Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.309867	Ptk9	protein tyrosine kinase 9	15	15 F1	19230
Gene Ontology	actin binding | cytoskeleton | intracellular
Human Homolog	PTK9[PTK9 protein tyrosine kinase 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCTGTGG (4) 14.7 0.0147 P8 Cb GC GTTTCAAAGA (2) 1.6 0.0016 Cb medulloblastoma CACATAAGCA (3) 2.3 0.0023 Cb medulloblastoma CACTTATAAA (4) 2.3 0.0023 Cb medulloblastoma TAATTTTTCA 2.3 0.0023 Cb medulloblastoma TCTTCTGTGG (4) 2.3 0.0023 P8 GC+1d culture TCTTCTGTGG (4) 6.8 0.0068 P8 GC+1d culture GTTTCAAAGA (2) 4.6 0.0046 P8 GC+1d culture CACATAAGCA (3) 1.1 0.0011 P8 GC+1d culture TTCGAAAGCC 1.1 0.0011 P8 GC+SHH+1d culture TCTTCTGTGG (4) 14.1 0.0141 P8 GC+SHH+1d culture GTTTCAAAGA (2) 4.7 0.0047 P8 GC+SHH+1d culture TTCGAAAGCC 2.3 0.0023 P8 GC+SHH+1d culture CACTTATAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCAGGAAGG (5) 1.2 0.0012 3T3 fibroblasts TCTTCTGTGG (4) 3.5 0.0035 E15 cortex GTTTCAAAGA (2) 4.9 0.0049 P1 cortex TCTTCTGTGG (4) 4.5 0.0045 Hypothalamus TCTTCTGTGG (4) 5.4 0.0054 Hypothalamus GTATGAAATA (5) 3.6 0.0036 Hypothalamus ATTTTTATTT (10) 1.8 0.0018 Hypothalamus CACATAAGCA (3) 1.8 0.0018 Hypothalamus CACTTATAAA (4) 1.8 0.0018 Hypothalamus GTTTCAAAGA (2) 1.8 0.0018 E12.5 retina TCTTCTGTGG (4) 15 0.015 E12.5 retina GTTTCAAAGA (2) 3.8 0.0038 E12.5 retina TAATTTTTCA 3.8 0.0038 E12.5 retina TTCGAAAGCC 1.9 0.0019 E14.5 retina TCTTCTGTGG (4) 7.3 0.0073 E14.5 retina TTCGAAAGCC 5.5 0.0055 E16.5 retina TCTTCTGTGG (4) 5.4 0.0054 E18.5 retina TCTTCTGTGG (4) 9.1 0.0091 E18.5 retina TTCGAAAGCC 1.8 0.0018 P0.5 retina TCTTCTGTGG (4) 7.9 0.0079 P0.5 retina GTTTCAAAGA (2) 2 0.002 P2.5 retina TTCGAAAGCC 12.3 0.0123 P2.5 retina TCTTCTGTGG (4) 8.8 0.0088 P2.5 retina GTTTCAAAGA (2) 3.5 0.0035 P2.5 retina GTATGAAATA (5) 1.8 0.0018 P4.5 retina GTTTCAAAGA (2) 2 0.002 P4.5 retina TTCGAAAGCC 2 0.002 P6.5 retina TCTTCTGTGG (4) 8.3 0.0083 P6.5 retina TTCGAAAGCC 6.7 0.0067 P6.5 retina CACTTATAAA (4) 3.3 0.0033 P6.5 retina ATTTTTATTT (10) 1.7 0.0017 P6.5 retina CACATAAGCA (3) 1.7 0.0017 P10.5 crx- retina TCTTCTGTGG (4) 11.1 0.0111 P10.5 crx- retina GTTTCAAAGA (2) 5.6 0.0056 P10.5 crx- retina CACATAAGCA (3) 1.9 0.0019 P10.5 crx- retina CACTTATAAA (4) 1.9 0.0019 P10.5 crx- retina GTATGAAATA (5) 1.9 0.0019 P10.5 crx- retina TAATTTTTCA 1.9 0.0019 P10.5 crx+ retina TCTTCTGTGG (4) 11.5 0.0115 P10.5 crx+ retina GTTTCAAAGA (2) 5.8 0.0058 P10.5 crx+ retina CACATAAGCA (3) 1.9 0.0019 P10.5 crx+ retina CACTTATAAA (4) 1.9 0.0019 P10.5 crx+ retina CTCAGGAAGG (5) 1.9 0.0019 Adult retinal CTCAGGAAGG (5) 1.9 0.0019 Adult retinal GTTTCAAAGA (2) 1.9 0.0019 ONL ATTTTTATTT (10) 3.8 0.0038 ONL TTCGAAAGCC 3.8 0.0038 ONL CACATAAGCA (3) 1.9 0.0019 ONL CACTTATAAA (4) 1.9 0.0019 ONL TCTTCTGTGG (4) 1.9 0.0019