Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3118	Actr1a	ARP1 actin-related protein 1 homolog A (yeast)	19		54130
Gene Ontology	actin cytoskeleton | actin filament | cytoskeleton | dynactin complex | microtubule associated complex | motor activity | structural constituent of cytoskeleton | structural molecule activity | vesicle-mediated transport
Human Homolog	ACTR1A[ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGCAGTG (2) 24.5 0.0245 P8 Cb GC GATTTACGGC 3.3 0.0033 P8 Cb GC GGATTCGGAG (3) 3.3 0.0033 P8 Cb GC TTGCCTTTTG (4) 3.3 0.0033 P8 Cb GC ATAACAAAGA (2) 1.6 0.0016 P8 Cb GC GAACTGCAGG (10) 1.6 0.0016 P8 Cb GC GCAGGAGCCC (3) 1.6 0.0016 P8 Cb GC GGTTGCCACA (3) 1.6 0.0016 P8 Cb GC GTGCTAGAGG (3) 1.6 0.0016 Cb medulloblastoma GGATTCGGAG (3) 4.6 0.0046 Cb medulloblastoma GACTGCAGTG (2) 2.3 0.0023 Cb medulloblastoma GATTGGAGGT 2.3 0.0023 Cb medulloblastoma GGCTCAGGAC (2) 2.3 0.0023 Cb medulloblastoma GGTTGCCACA (3) 2.3 0.0023 P8 GC+1d culture GACTGCAGTG (2) 24 0.024 P8 GC+1d culture GAACTGCAGG (10) 2.3 0.0023 P8 GC+1d culture GATTGGAGGT 1.1 0.0011 P8 GC+1d culture GGCTCAGGAC (2) 1.1 0.0011 P8 GC+SHH+1d culture GACTGCAGTG (2) 19.9 0.0199 P8 GC+SHH+1d culture GGCTCAGGAC (2) 4.7 0.0047 P8 GC+SHH+1d culture GAACTGCAGG (10) 2.3 0.0023 P8 GC+SHH+1d culture GCAGGAGCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture CCTCACTCCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GATTGGAGGT 1.2 0.0012 P8 GC+SHH+1d culture GGATTCGGAG (3) 1.2 0.0012 3T3 fibroblasts GACTGCAGTG (2) 42.1 0.0421 3T3 fibroblasts GGCTCAGGAC (2) 7 0.007 3T3 fibroblasts GCAGGAGCCC (3) 3.5 0.0035 3T3 fibroblasts GGATTCGGAG (3) 3.5 0.0035 3T3 fibroblasts GTGCTAGAGG (3) 3.5 0.0035 E15 cortex GACTGCAGTG (2) 24.7 0.0247 E15 cortex GAACTGCAGG (10) 9.9 0.0099 E15 cortex TTGCCTTTTG (4) 4.9 0.0049 P1 cortex GACTGCAGTG (2) 13.6 0.0136 P1 cortex GAACTGCAGG (10) 9.1 0.0091 P1 cortex GGCTCAGGAC (2) 4.5 0.0045 Hypothalamus GACTGCAGTG (2) 7.2 0.0072 Hypothalamus GGCTCAGGAC (2) 1.8 0.0018 Hypothalamus TTGCCTTTTG (4) 1.8 0.0018 E12.5 retina GACTGCAGTG (2) 15 0.015 E12.5 retina GAACTGCAGG (10) 1.9 0.0019 E12.5 retina GCAGCCTCTT (11) 1.9 0.0019 E12.5 retina GGCTCAGGAC (2) 1.9 0.0019 E14.5 retina GAACTGCAGG (10) 1.8 0.0018 E14.5 retina GACTGCAGTG (2) 1.8 0.0018 E14.5 retina GCAGCCTCTT (11) 1.8 0.0018 E16.5 retina GACTGCAGTG (2) 12.7 0.0127 E16.5 retina GAACTGCAGG (10) 1.8 0.0018 E16.5 retina GGTTGCCACA (3) 1.8 0.0018 E16.5 retina TTGCCTTTTG (4) 1.8 0.0018 E18.5 retina GACTGCAGTG (2) 3.6 0.0036 E18.5 retina GAACTGCAGG (10) 1.8 0.0018 E18.5 retina GATGTGTAAA (4) 1.8 0.0018 P0.5 retina GACTGCAGTG (2) 11.8 0.0118 P0.5 retina GAACTGCAGG (10) 2 0.002 P0.5 retina GATGTGTAAA (4) 2 0.002 P0.5 retina GCAGGAGCCC (3) 2 0.002 P2.5 retina GACTGCAGTG (2) 7 0.007 P2.5 retina GATGTGTAAA (4) 1.8 0.0018 P2.5 retina GGTTGCCACA (3) 1.8 0.0018 P4.5 retina GATGTGTAAA (4) 23.8 0.0238 P4.5 retina GACTGCAGTG (2) 4 0.004 P4.5 retina ATAACAAAGA (2) 2 0.002 P4.5 retina GCAGCCTCTT (11) 2 0.002 P6.5 retina GATGTGTAAA (4) 38.3 0.0383 P6.5 retina GACTGCAGTG (2) 6.7 0.0067 P6.5 retina GACAGCACAG (4) 3.3 0.0033 P6.5 retina GCAGCCTCTT (11) 3.3 0.0033 P6.5 retina GATTTACGGC 1.7 0.0017 P6.5 retina GGCTCAGGAC (2) 1.7 0.0017 P10.5 crx- retina GATGTGTAAA (4) 9.3 0.0093 P10.5 crx- retina GACTGCAGTG (2) 7.4 0.0074 P10.5 crx- retina GCAGCCTCTT (11) 1.9 0.0019 P10.5 crx- retina GGCTCAGGAC (2) 1.9 0.0019 P10.5 crx+ retina GATGTGTAAA (4) 50 0.05 P10.5 crx+ retina GACTGCAGTG (2) 26.9 0.0269 P10.5 crx+ retina CCTCACTCCA (3) 3.8 0.0038 P10.5 crx+ retina GAACTGCAGG (10) 3.8 0.0038 P10.5 crx+ retina GGCTCAGGAC (2) 3.8 0.0038 P10.5 crx+ retina ATAACAAAGA (2) 1.9 0.0019 Adult retinal GATGTGTAAA (4) 42.6 0.0426 Adult retinal GACTGCAGTG (2) 5.6 0.0056 Adult retinal GAACTGCAGG (10) 1.9 0.0019 Adult retinal GATTGGAGGT 1.9 0.0019 Adult retinal GGCTCAGGAC (2) 1.9 0.0019 Adult retinal TTGCCTTTTG (4) 1.9 0.0019 ONL GATGTGTAAA (4) 49.8 0.0498 ONL GACTGCAGTG (2) 7.7 0.0077 ONL CCTCACTCCA (3) 1.9 0.0019 ONL GACAGCACAG (4) 1.9 0.0019 ONL GATTGGAGGT 1.9 0.0019 ONL GGTTGCCACA (3) 1.9 0.0019 ONL GTGCTAGAGG (3) 1.9 0.0019