Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3118	Actr1a	ARP1 actin-related protein 1 homolog A (yeast)	19		54130
Gene Ontology	actin cytoskeleton | actin filament | cytoskeleton | dynactin complex | microtubule associated complex | motor activity | structural constituent of cytoskeleton | structural molecule activity | vesicle-mediated transport
Human Homolog	ACTR1A[ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGCAGTG 24.5 0.0245 P8 Cb GC GATTTACGGC 3.3 0.0033 P8 Cb GC TTGCCTTTTG (2) 3.3 0.0033 P8 Cb GC ATAACAAAGA 1.6 0.0016 P8 Cb GC GCAGGAGCCC 1.6 0.0016 P8 Cb GC GGTTGCCACA 1.6 0.0016 P8 Cb GC GTGCTAGAGG (3) 1.6 0.0016 Cb medulloblastoma GACTGCAGTG 2.3 0.0023 Cb medulloblastoma GATTGGAGGT 2.3 0.0023 Cb medulloblastoma GGTTGCCACA 2.3 0.0023 P8 GC+1d culture GACTGCAGTG 24 0.024 P8 GC+1d culture GATTGGAGGT 1.1 0.0011 P8 GC+SHH+1d culture GACTGCAGTG 19.9 0.0199 P8 GC+SHH+1d culture GCAGGAGCCC 2.3 0.0023 P8 GC+SHH+1d culture GATTGGAGGT 1.2 0.0012 3T3 fibroblasts GACTGCAGTG 42.1 0.0421 3T3 fibroblasts GCAGGAGCCC 3.5 0.0035 3T3 fibroblasts GTGCTAGAGG (3) 3.5 0.0035 E15 cortex GACTGCAGTG 24.7 0.0247 E15 cortex TTGCCTTTTG (2) 4.9 0.0049 P1 cortex GACTGCAGTG 13.6 0.0136 Hypothalamus GACTGCAGTG 7.2 0.0072 Hypothalamus TTGCCTTTTG (2) 1.8 0.0018 E12.5 retina GACTGCAGTG 15 0.015 E14.5 retina GACTGCAGTG 1.8 0.0018 E16.5 retina GACTGCAGTG 12.7 0.0127 E16.5 retina GGTTGCCACA 1.8 0.0018 E16.5 retina TTGCCTTTTG (2) 1.8 0.0018 E18.5 retina GACTGCAGTG 3.6 0.0036 P0.5 retina GACTGCAGTG 11.8 0.0118 P0.5 retina GCAGGAGCCC 2 0.002 P2.5 retina GACTGCAGTG 7 0.007 P2.5 retina GGTTGCCACA 1.8 0.0018 P4.5 retina GACTGCAGTG 4 0.004 P4.5 retina ATAACAAAGA 2 0.002 P6.5 retina GACTGCAGTG 6.7 0.0067 P6.5 retina GATTTACGGC 1.7 0.0017 P10.5 crx- retina GACTGCAGTG 7.4 0.0074 P10.5 crx+ retina GACTGCAGTG 26.9 0.0269 P10.5 crx+ retina ATAACAAAGA 1.9 0.0019 Adult retinal GACTGCAGTG 5.6 0.0056 Adult retinal GATTGGAGGT 1.9 0.0019 Adult retinal TTGCCTTTTG (2) 1.9 0.0019 ONL GACTGCAGTG 7.7 0.0077 ONL GATTGGAGGT 1.9 0.0019 ONL GGTTGCCACA 1.9 0.0019 ONL GTGCTAGAGG (3) 1.9 0.0019