Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3158	Rplp1	ribosomal protein, large, P1	9		56040
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP1[ribosomal protein, large, P1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 245 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTTCGGTC (5) 420.9 0.4209 P8 Cb GC CTGTAGACTG (2) 14.7 0.0147 P8 Cb GC ATGATAATGG (16) 4.9 0.0049 P8 Cb GC AAAAAAAAAG (19) 3.3 0.0033 P8 Cb GC GCTTCGGTCT 3.3 0.0033 P8 Cb GC TGCTTCGGTC 3.3 0.0033 P8 Cb GC AGCTTCGGTC 1.6 0.0016 P8 Cb GC CAAGAGCCCA (2) 1.6 0.0016 P8 Cb GC CTGTAAACTG (2) 1.6 0.0016 P8 Cb GC TCATCTTCAG 1.6 0.0016 P8 Cb GC TTGCCTTCCC (9) 1.6 0.0016 Cb medulloblastoma GGCTTTGGTC (3) 143.4 0.1434 Cb medulloblastoma GGCTTCGGTC (5) 117.9 0.1179 Cb medulloblastoma AAAAAAAAAG (19) 13.9 0.0139 Cb medulloblastoma CTGTAGACTG (2) 6.9 0.0069 Cb medulloblastoma CTGTAAACTG (2) 2.3 0.0023 Cb medulloblastoma GCTTCCGTCT (2) 2.3 0.0023 Cb medulloblastoma GCTTCGGTCT 2.3 0.0023 Cb medulloblastoma GCTTTGGCTT (7) 2.3 0.0023 Cb medulloblastoma GGCTTTGGTT (3) 2.3 0.0023 Cb medulloblastoma GGCTTTTGGT (2) 2.3 0.0023 Cb medulloblastoma TGCTTCGGTC 2.3 0.0023 Cb medulloblastoma TTGCCTTCCC (9) 2.3 0.0023 P8 GC+1d culture GGCTTCGGTC (5) 231.7 0.2317 P8 GC+1d culture CTGTAGACTG (2) 12.6 0.0126 P8 GC+1d culture TTGCCTTCCC (9) 5.7 0.0057 P8 GC+1d culture ATGATAATGG (16) 3.4 0.0034 P8 GC+1d culture CTGTATACTT (7) 3.4 0.0034 P8 GC+1d culture GCTTCCGTCT (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAG (19) 1.1 0.0011 P8 GC+1d culture AGCTTCGGTC 1.1 0.0011 P8 GC+1d culture GCTTCGGTCT 1.1 0.0011 P8 GC+1d culture GGCTTTTGGT (2) 1.1 0.0011 P8 GC+1d culture GGTGCACCTC (2) 1.1 0.0011 P8 GC+1d culture GGTTTCGGTC 1.1 0.0011 P8 GC+1d culture TCATCTTCAG 1.1 0.0011 P8 GC+SHH+1d culture GGCTTCGGTC (5) 293.9 0.2939 P8 GC+SHH+1d culture AAAAAAAAAG (19) 5.9 0.0059 P8 GC+SHH+1d culture CTGTAGACTG (2) 4.7 0.0047 P8 GC+SHH+1d culture ATGATAATGG (16) 3.5 0.0035 P8 GC+SHH+1d culture GCTTTGGCTT (7) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTCGGCC (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTCGGTT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTGGGTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTTTGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TCATCTTCAG 2.3 0.0023 P8 GC+SHH+1d culture TTGCCTTCCC (9) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture AGCTTCGGTC 1.2 0.0012 P8 GC+SHH+1d culture CTGTATACTT (7) 1.2 0.0012 P8 GC+SHH+1d culture GCTTCCGTCT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCTTTGGTC (3) 1.2 0.0012 3T3 fibroblasts GGCTTCGGTC (5) 543.3 0.5433 3T3 fibroblasts CTGTAGACTG (2) 91.1 0.0911 3T3 fibroblasts TTGCCTTCCC (9) 21 0.021 3T3 fibroblasts GCTTTGGCTT (7) 7 0.007 3T3 fibroblasts CAAGAGCCCA (2) 3.5 0.0035 3T3 fibroblasts GCTTCCGTCT (2) 3.5 0.0035 3T3 fibroblasts GCTTCGGTCT 3.5 0.0035 3T3 fibroblasts GGCTTCGGCC (2) 3.5 0.0035 3T3 fibroblasts GGCTTCGGGC (2) 3.5 0.0035 3T3 fibroblasts GGGCTTCGGT 3.5 0.0035 3T3 fibroblasts GGTGCACCTC (2) 3.5 0.0035 3T3 fibroblasts TCATCTTCAG 3.5 0.0035 E15 cortex GGCTTCGGTC (5) 188 0.188 E15 cortex CTGTAGACTG (2) 9.9 0.0099 E15 cortex GCTTTGGCTT (7) 9.9 0.0099 E15 cortex GGCTTCGGGC (2) 9.9 0.0099 E15 cortex GGGCTTCGGT 9.9 0.0099 E15 cortex TGCTTCGGTC 9.9 0.0099 E15 cortex AGCTTCGGTC 4.9 0.0049 E15 cortex ATGATAATGG (16) 4.9 0.0049 E15 cortex GGATTCGGTC (2) 4.9 0.0049 E15 cortex GGTGCACCTC (2) 4.9 0.0049 E15 cortex TAGGGGCTGG 4.9 0.0049 P1 cortex GGCTTCGGTC (5) 127.3 0.1273 P1 cortex CTGTAGACTG (2) 18.2 0.0182 P1 cortex AAAAAAAAAG (19) 9.1 0.0091 P1 cortex ATGATAATGG (16) 9.1 0.0091 P1 cortex AGCTTCGGTC 4.5 0.0045 P1 cortex TTGCCTTCCC (9) 4.5 0.0045 Hypothalamus GGCTTCGGTC (5) 327.8 0.3278 Hypothalamus TCATCTTCAG 34.4 0.0344 Hypothalamus ATGATAATGG (16) 19.9 0.0199 Hypothalamus GCTTCCGTCT (2) 14.5 0.0145 Hypothalamus GCTTCGGTCT 7.2 0.0072 Hypothalamus AAAAAAAAAG (19) 5.4 0.0054 Hypothalamus CTGTAGACTG (2) 5.4 0.0054 Hypothalamus TTGCCTTCCC (9) 5.4 0.0054 Hypothalamus AGCTTCGGTC 1.8 0.0018 Hypothalamus GGCCTTCGGT 1.8 0.0018 Hypothalamus GGCTTCGGCC (2) 1.8 0.0018 Hypothalamus TGGCCCACCC (3) 1.8 0.0018 E12.5 retina GGCTTCGGTC (5) 533.2 0.5332 E12.5 retina CTGTAGACTG (2) 9.4 0.0094 E12.5 retina GCTTCGGTCT 7.5 0.0075 E12.5 retina TTGCCTTCCC (9) 7.5 0.0075 E12.5 retina GGCCTTCGGT 5.6 0.0056 E12.5 retina GGCTTTGGTC (3) 5.6 0.0056 E12.5 retina TCATCTTCAG 3.8 0.0038 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina ATGATAATGG (16) 1.9 0.0019 E12.5 retina CTGTAAACTG (2) 1.9 0.0019 E12.5 retina GCTTCCGTCT (2) 1.9 0.0019 E12.5 retina GGTGCACCTC (2) 1.9 0.0019 E14.5 retina GGCTTCGGTC (5) 322.5 0.3225 E14.5 retina TCATCTTCAG 23.7 0.0237 E14.5 retina ATGATAATGG (16) 18.2 0.0182 E14.5 retina GGCTTTGGTC (3) 10.9 0.0109 E14.5 retina TTGCCTTCCC (9) 7.3 0.0073 E14.5 retina CTGTAGACTG (2) 5.5 0.0055 E14.5 retina GGCTTCGGCC (2) 3.6 0.0036 E14.5 retina GGCTTCGGGC (2) 3.6 0.0036 E14.5 retina GCATACTGTT (10) 1.8 0.0018 E14.5 retina GCTTCCGTCT (2) 1.8 0.0018 E14.5 retina GGCTTCGGTT (2) 1.8 0.0018 E14.5 retina GGCTTGGGTC (2) 1.8 0.0018 E14.5 retina TGGCCCACCC (3) 1.8 0.0018 E16.5 retina GGCTTCGGTC (5) 384 0.384 E16.5 retina ATGATAATGG (16) 19.9 0.0199 E16.5 retina TCATCTTCAG 10.9 0.0109 E16.5 retina TTGCCTTCCC (9) 5.4 0.0054 E16.5 retina GGCCTTCGGT 3.6 0.0036 E16.5 retina GGCTTCGGGC (2) 3.6 0.0036 E16.5 retina CTGTAAACTG (2) 1.8 0.0018 E16.5 retina GCATACTGTT (10) 1.8 0.0018 E16.5 retina GCTTCGGTCT 1.8 0.0018 E16.5 retina GCTTTGGCTT (7) 1.8 0.0018 E16.5 retina GGCTTCGGCC (2) 1.8 0.0018 E16.5 retina GGCTTCGGTT (2) 1.8 0.0018 E16.5 retina GGCTTTTGGT (2) 1.8 0.0018 E16.5 retina TAGGGGCTGG 1.8 0.0018 E18.5 retina GGCTTCGGTC (5) 458.4 0.4584 E18.5 retina ATGATAATGG (16) 14.6 0.0146 E18.5 retina CTGTAGACTG (2) 10.9 0.0109 E18.5 retina GGATTCGGTC (2) 7.3 0.0073 E18.5 retina AAAAAAAAAG (19) 5.5 0.0055 E18.5 retina GGCTTCGGTT (2) 5.5 0.0055 E18.5 retina CAAGAGCCCA (2) 1.8 0.0018 E18.5 retina GCTTCGGTCT 1.8 0.0018 E18.5 retina GGCTTCGGCC (2) 1.8 0.0018 E18.5 retina GGCTTCGGGC (2) 1.8 0.0018 E18.5 retina TCATCTTCAG 1.8 0.0018 E18.5 retina TTGCCTTCCC (9) 1.8 0.0018 P0.5 retina GGCTTCGGTC (5) 292.4 0.2924 P0.5 retina TTGCCTTCCC (9) 15.7 0.0157 P0.5 retina ATGATAATGG (16) 7.9 0.0079 P0.5 retina CTGTAGACTG (2) 5.9 0.0059 P0.5 retina GGCTTCGGCC (2) 3.9 0.0039 P0.5 retina GGTTTCGGTC 3.9 0.0039 P0.5 retina TCATCTTCAG 3.9 0.0039 P0.5 retina CTGTATACTT (7) 2 0.002 P0.5 retina GCTTCGGTCT 2 0.002 P0.5 retina GCTTTGGCTT (7) 2 0.002 P0.5 retina GGCTTCGGGC (2) 2 0.002 P0.5 retina GGTGCACCTC (2) 2 0.002 P2.5 retina GGCTTCGGTC (5) 297.4 0.2974 P2.5 retina CTGTAGACTG (2) 8.8 0.0088 P2.5 retina ATGATAATGG (16) 7 0.007 P2.5 retina TTGCCTTCCC (9) 7 0.007 P2.5 retina AAAAAAAAAG (19) 3.5 0.0035 P2.5 retina GGCTTCGGCC (2) 3.5 0.0035 P2.5 retina CAAGAGCCCA (2) 1.8 0.0018 P2.5 retina GCTTCGGTCT 1.8 0.0018 P2.5 retina GGCCTTCGGT 1.8 0.0018 P2.5 retina GGCTTCGGGC (2) 1.8 0.0018 P2.5 retina GGCTTGGGTC (2) 1.8 0.0018 P2.5 retina GGCTTTGGTC (3) 1.8 0.0018 P2.5 retina GGCTTTTGGT (2) 1.8 0.0018 P2.5 retina TCATCTTCAG 1.8 0.0018 P2.5 retina TGCTTCGGTC 1.8 0.0018 P2.5 retina TGGCCCACCC (3) 1.8 0.0018 P4.5 retina GGCTTCGGTC (5) 309.1 0.3091 P4.5 retina AAAAAAAAAG (19) 13.9 0.0139 P4.5 retina ATGATAATGG (16) 9.9 0.0099 P4.5 retina GGCTTTGGTC (3) 4 0.004 P4.5 retina GGCTTTTGGT (2) 4 0.004 P4.5 retina TCATCTTCAG 4 0.004 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GGCTTCGGCC (2) 2 0.002 P4.5 retina TTGCCTTCCC (9) 2 0.002 P6.5 retina GGCTTCGGTC (5) 221.8 0.2218 P6.5 retina AAAAAAAAAG (19) 8.3 0.0083 P6.5 retina ATGATAATGG (16) 8.3 0.0083 P6.5 retina CTGTAGACTG (2) 5 0.005 P6.5 retina GGCTTCTTCT (8) 5 0.005 P6.5 retina CAAGAGCCCA (2) 3.3 0.0033 P6.5 retina TTGCCTTCCC (9) 3.3 0.0033 P6.5 retina GCATACTGTT (10) 1.7 0.0017 P6.5 retina GCTTTGGCTT (7) 1.7 0.0017 P6.5 retina GGCCTTCGGT 1.7 0.0017 P6.5 retina GGCTTCGGTT (2) 1.7 0.0017 P6.5 retina GGTTTCGGTC 1.7 0.0017 P6.5 retina TCATCTTCAG 1.7 0.0017 P6.5 retina TGCTTCGGTC 1.7 0.0017 P10.5 crx- retina GGCTTTGGTC (3) 358.6 0.3586 P10.5 crx- retina TCATCTTCAG 13 0.013 P10.5 crx- retina GGCTTTTGGT (2) 9.3 0.0093 P10.5 crx- retina GCTTCCGTCT (2) 7.4 0.0074 P10.5 crx- retina TTGCCTTCCC (9) 7.4 0.0074 P10.5 crx- retina CTGTAGACTG (2) 5.6 0.0056 P10.5 crx- retina CAAGAGCCCA (2) 3.7 0.0037 P10.5 crx- retina GCTTTGGCTT (7) 3.7 0.0037 P10.5 crx- retina GGTTTCGTTT 3.7 0.0037 P10.5 crx- retina AAAAAAAAAG (19) 1.9 0.0019 P10.5 crx- retina ATGATAATGG (16) 1.9 0.0019 P10.5 crx- retina CTGTATACTT (7) 1.9 0.0019 P10.5 crx- retina GGCTTCGGTC (5) 1.9 0.0019 P10.5 crx- retina GGCTTTGGTT (3) 1.9 0.0019 P10.5 crx- retina GGTGCACCTC (2) 1.9 0.0019 P10.5 crx- retina TGGCCCACCC (3) 1.9 0.0019 P10.5 crx+ retina GGCTTTGGTC (3) 355.7 0.3557 P10.5 crx+ retina CTGTAGACTG (2) 15.4 0.0154 P10.5 crx+ retina AAAAAAAAAG (19) 7.7 0.0077 P10.5 crx+ retina ATGATAATGG (16) 3.8 0.0038 P10.5 crx+ retina GGCTTTGGTT (3) 3.8 0.0038 P10.5 crx+ retina GGCTTTTGGT (2) 3.8 0.0038 P10.5 crx+ retina TCATCTTCAG 3.8 0.0038 P10.5 crx+ retina CAAGAGCCCA (2) 1.9 0.0019 P10.5 crx+ retina CTGTATACTT (7) 1.9 0.0019 P10.5 crx+ retina GGCTTCGGTC (5) 1.9 0.0019 P10.5 crx+ retina GGTTTCGTTT 1.9 0.0019 P10.5 crx+ retina TTGCCTTCCC (9) 1.9 0.0019 Adult retinal GGCTTCGGTC (5) 142.6 0.1426 Adult retinal ATGATAATGG (16) 9.3 0.0093 Adult retinal TTGCCTTCCC (9) 7.4 0.0074 Adult retinal GCTTCGGTCT 5.6 0.0056 Adult retinal GGTGCACCTC (2) 5.6 0.0056 Adult retinal GGCTTCGGGC (2) 3.7 0.0037 Adult retinal GGGCTTCGGT 3.7 0.0037 Adult retinal AAAAAAAAAG (19) 1.9 0.0019 Adult retinal CTGTAGACTG (2) 1.9 0.0019 Adult retinal GGCTTTGGTC (3) 1.9 0.0019 Adult retinal GGCTTTTGGT (2) 1.9 0.0019 Adult retinal TCATCTTCAG 1.9 0.0019 ONL GGCTTCGGTC (5) 93.9 0.0939 ONL GGCTTTGGTC (3) 57.5 0.0575 ONL ATGATAATGG (16) 11.5 0.0115 ONL TAGGGGCTGG 3.8 0.0038 ONL TCATCTTCAG 3.8 0.0038 ONL AAAAAAAAAG (19) 1.9 0.0019 ONL CTGTAGACTG (2) 1.9 0.0019 ONL GGATTCGGTC (2) 1.9 0.0019 ONL GGCTTTGGTT (3) 1.9 0.0019 ONL GGCTTTTGGT (2) 1.9 0.0019