Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3158	Rplp1	ribosomal protein, large, P1	9		56040
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP1[ribosomal protein, large, P1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 245 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAG AGCTTCGGTC ATGATAATGG (3) CAAGAGCCCA CTGTAAACTG CTGTAGACTG GCTTCGGTCT GGCTTCGGTC TCATCTTCAG TGCTTCGGTC TTGCCTTCCC 458.4 0.4584 Cb medulloblastoma AAAAAAAAAG CTGTAAACTG CTGTAGACTG GCTTCCGTCT GCTTCGGTCT GCTTTGGCTT (2) GGCTTCGGTC GGCTTTGGTC GGCTTTGGTT GGCTTTTGGT TGCTTCGGTC TTGCCTTCCC 300.5 0.3005 P8 GC+1d culture AAAAAAAAAG AGCTTCGGTC ATGATAATGG (3) CTGTAGACTG CTGTATACTT (4) GCTTCCGTCT GCTTCGGTCT GGCTTCGGTC GGCTTTTGGT GGTGCACCTC GGTTTCGGTC TCATCTTCAG TTGCCTTCCC 266.8 0.2668 P8 GC+SHH+1d culture AAAAAAAAAG ACTAGTGCTT (4) AGCTTCGGTC ATGATAATGG (3) CTGTAGACTG CTGTATACTT (4) GCTTCCGTCT GCTTTGGCTT (2) GGCTTCGGCC (2) GGCTTCGGTC GGCTTCGGTT GGCTTGGGTC GGCTTTGGTC GGCTTTTGGT TCATCTTCAG TTGCCTTCCC 330.1 0.3301 3T3 fibroblasts CAAGAGCCCA CTGTAGACTG GCTTCCGTCT GCTTCGGTCT GCTTTGGCTT (2) GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGGCTTCGGT GGTGCACCTC TCATCTTCAG TTGCCTTCCC 690.4 0.6904 E15 cortex AGCTTCGGTC ATGATAATGG (3) CTGTAGACTG GCTTTGGCTT (2) GGATTCGGTC GGCTTCGGGC GGCTTCGGTC GGGCTTCGGT GGTGCACCTC TAGGGGCTGG TGCTTCGGTC 262 0.262 P1 cortex AAAAAAAAAG AGCTTCGGTC ATGATAATGG (3) CTGTAGACTG GGCTTCGGTC TTGCCTTCCC 172.7 0.1727 Hypothalamus AAAAAAAAAG AGCTTCGGTC ATGATAATGG (3) CTGTAGACTG GCTTCCGTCT GCTTCGGTCT GGCCTTCGGT GGCTTCGGCC (2) GGCTTCGGTC TCATCTTCAG TGGCCCACCC TTGCCTTCCC 427.2 0.4272 E12.5 retina ACTAGTGCTT (4) ATGATAATGG (3) CTGTAAACTG CTGTAGACTG GCTTCCGTCT GCTTCGGTCT GGCCTTCGGT GGCTTCGGTC GGCTTTGGTC GGTGCACCTC TCATCTTCAG TTGCCTTCCC 582.1 0.5821 E14.5 retina ATGATAATGG (3) CTGTAGACTG GCATACTGTT GCTTCCGTCT GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGCTTCGGTT GGCTTGGGTC GGCTTTGGTC TCATCTTCAG TGGCCCACCC TTGCCTTCCC 404.3 0.4043 E16.5 retina ATGATAATGG (3) CTGTAAACTG GCATACTGTT GCTTCGGTCT GCTTTGGCTT (2) GGCCTTCGGT GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGCTTCGGTT GGCTTTTGGT TAGGGGCTGG TCATCTTCAG TTGCCTTCCC 441.8 0.4418 E18.5 retina AAAAAAAAAG ATGATAATGG (3) CAAGAGCCCA CTGTAGACTG GCTTCGGTCT GGATTCGGTC GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGCTTCGGTT TCATCTTCAG TTGCCTTCCC 513 0.513 P0.5 retina ATGATAATGG (3) CTGTAGACTG CTGTATACTT (4) GCTTCGGTCT GCTTTGGCTT (2) GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGTGCACCTC GGTTTCGGTC TCATCTTCAG TTGCCTTCCC 343.6 0.3436 P2.5 retina AAAAAAAAAG ATGATAATGG (3) CAAGAGCCCA CTGTAGACTG GCTTCGGTCT GGCCTTCGGT GGCTTCGGCC (2) GGCTTCGGGC GGCTTCGGTC GGCTTGGGTC GGCTTTGGTC GGCTTTTGGT TCATCTTCAG TGCTTCGGTC TGGCCCACCC TTGCCTTCCC 345.2 0.3452 P4.5 retina AAAAAAAAAG ACTAGTGCTT (4) ATGATAATGG (3) GGCTTCGGCC (2) GGCTTCGGTC GGCTTTGGTC GGCTTTTGGT TCATCTTCAG TTGCCTTCCC 350.9 0.3509 P6.5 retina AAAAAAAAAG ATGATAATGG (3) CAAGAGCCCA CTGTAGACTG GCATACTGTT GCTTTGGCTT (2) GGCCTTCGGT GGCTTCGGTC GGCTTCGGTT GGCTTCTTCT (2) GGTTTCGGTC TCATCTTCAG TGCTTCGGTC TTGCCTTCCC 266.9 0.2669 P10.5 crx- retina AAAAAAAAAG ATGATAATGG (3) CAAGAGCCCA CTGTAGACTG CTGTATACTT (4) GCTTCCGTCT GCTTTGGCTT (2) GGCTTCGGTC GGCTTTGGTC GGCTTTGGTT GGCTTTTGGT GGTGCACCTC GGTTTCGTTT TCATCTTCAG TGGCCCACCC TTGCCTTCCC 425.7 0.4257 P10.5 crx+ retina AAAAAAAAAG ATGATAATGG (3) CAAGAGCCCA CTGTAGACTG CTGTATACTT (4) GGCTTCGGTC GGCTTTGGTC GGCTTTGGTT GGCTTTTGGT GGTTTCGTTT TCATCTTCAG TTGCCTTCCC 403.5 0.4035 Adult retinal AAAAAAAAAG ATGATAATGG (3) CTGTAGACTG GCTTCGGTCT GGCTTCGGGC GGCTTCGGTC GGCTTTGGTC GGCTTTTGGT GGGCTTCGGT GGTGCACCTC TCATCTTCAG TTGCCTTCCC 187.4 0.1874 ONL AAAAAAAAAG ATGATAATGG (3) CTGTAGACTG GGATTCGGTC GGCTTCGGTC GGCTTTGGTC GGCTTTGGTT GGCTTTTGGT TAGGGGCTGG TCATCTTCAG 180 0.18