Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.315962	Pgam1	phosphoglycerate mutase 1	19	19 10.0 cM	18648
Gene Ontology	bisphosphoglycerate mutase activity | bisphosphoglycerate phosphatase activity | catalytic activity | cytosol | glycolysis | hydrolase activity | intramolecular transferase activity, phosphotransferases | isomerase activity | metabolism | phosphoglycerate mutase activity
Human Homolog	PGAM1[phosphoglycerate mutase 1 (brain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGCAGTCC (2) CAGTTCTGGG (2) CTCCAGCTGC GAAGCTTGGG GGAGCTGAAG (4) GGGGCCCTGG (3) GTGGATTTTT TTCCAGCTGC 39 0.039 Cb medulloblastoma CAGTTCTGGG (2) GGAAACTGGG (2) GGAAAGGCTG GGAGCTGAAG (4) GGAGGCTGAA GGGGCCCTGG (3) GTGAATTTTA (2) GTGATTTTTA GTGGATTTTT TCAGAGTTTT TTCCAGCTGC 99.3 0.0993 P8 GC+1d culture AGGGCAGTCC (2) CTCCAGCTGC GAAGCTGTGG GAAGCTTGGG GTGGATTTTT TCTAGATTAG TTCCAGCTGC 44.4 0.0444 P8 GC+SHH+1d culture ATCCAGGGGT GAAGCTTGGG GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 59.8 0.0598 3T3 fibroblasts AGGTTACTTC CTCCAGCTGC GAAGCTGTGG GAAGCTTGGG GAGCCTGATC GGAGGCTGAA TCTAGATTAG TTCCAGCTGC 77.1 0.0771 E15 cortex GAAGCTGAAC TTCCAGCTGC 24.7 0.0247 P1 cortex CTCCAGCTGC GAAGCTGAAC GAAGCTTGGG TCTAGATTAG TTCCAGCTGC 27.1 0.0271 Hypothalamus GAAGCTGTGG GAAGCTGTTG (3) GAGCTGAGAC GGAAACTGGG (2) GGAAAGGCTG GGAGCTGAAG (4) GGAGGCTGAA GGGGCCCTGG (3) GTGATTTTTA TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 90.4 0.0904 E12.5 retina AGGTTACTTC ATCCAGGGGT CTCCAGCTGC GAAGCTGTGG GAAGCTGTTG (3) GAAGCTTGGG GTGATTTTTA GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 107.2 0.1072 E14.5 retina CAGTCCTGGG (4) GAAGCTGAAC GAGCCTGATC GGGGCCCTGG (3) GTGAATTTTA (2) GTGATTTTTA GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 50.9 0.0509 E16.5 retina ATCCAGGGGT GAAGCTGAAC GAAGCTGTGG GCTGCCTACA (2) GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 59.7 0.0597 E18.5 retina AGGTTACTTC ATCCAGGGGT GAAGCTTGGG GGAGCTGAAG (4) GTGAATTTTA (2) GTGGATTTTT TCTAGATTAG TTCCAGCTGC 90.9 0.0909 P0.5 retina CAGTCCTGGG (4) CAGTTCTGGG (2) GAAGCTGTGG GAAGCTTGGG GTGGATTTTT TCAGAGTTTT TCTAGATTAG TTCCAGCTGC 86.6 0.0866 P2.5 retina ATCCAGGGGT GAAGCTGAAC GAAGCTTGGG GGAAAGGCTG GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 68.8 0.0688 P4.5 retina AGGGCAGTCC (2) GAAGCTGTGG GAAGCTTGGG GGAAAGGCTG GGGGCCCTGG (3) GTGGATTTTT TCTAGATTAG TTCCAGCTGC 65.5 0.0655 P6.5 retina GAAGCTTGGG GGAAACTGGG (2) GGAAAGGCTG GGAGGCTGAA GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 98.5 0.0985 P10.5 crx- retina GAAGCTGAAC GAAGCTGTGG GAAGCTTGGG GAGCCTGATC GCTGCCTACA (2) GGAAACTGGG (2) GGAGCTGAAG (4) GGAGGCTGAA GTGGATTTTT TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 82.1 0.0821 P10.5 crx+ retina AGGTTACTTC CAGTCCTGGG (4) GCTGCCTACA (2) GGAAACTGGG (2) GGAAAGGCTG GGAGCTGAAG (4) GGGGCCCTGG (3) GTGGATTTTT TCTAGATTAG TTCCAGCTGC 109.4 0.1094 Adult retinal AGGTTACTTC ATCCAGGGGT GGAAACTGGG (2) GGGGCCCTGG (3) TCTAGATTAG TTCCAGCTGC TTTTCATTGT (2) 103.9 0.1039 ONL GAAGCTGAAC GAAGCTGTGG GGAGCTGAAG (4) GTGGATTTTT TCTAGATTAG TTCCAGCTGC 72.7 0.0727