Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.315962	Pgam1	phosphoglycerate mutase 1	19	19 10.0 cM	18648
Gene Ontology	bisphosphoglycerate mutase activity | bisphosphoglycerate phosphatase activity | catalytic activity | cytosol | glycolysis | hydrolase activity | intramolecular transferase activity, phosphotransferases | isomerase activity | metabolism | phosphoglycerate mutase activity
Human Homolog	PGAM1[phosphoglycerate mutase 1 (brain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCCAGCTGC (4) 24.5 0.0245 P8 Cb GC GTGGATTTTT (2) 4.9 0.0049 P8 Cb GC AGGGCAGTCC (3) 1.6 0.0016 P8 Cb GC CAGTTCTGGG (4) 1.6 0.0016 P8 Cb GC CTCCAGCTGC (3) 1.6 0.0016 P8 Cb GC GAAGCTTGGG (3) 1.6 0.0016 P8 Cb GC GGAGCTGAAG (5) 1.6 0.0016 P8 Cb GC GGGGCCCTGG (11) 1.6 0.0016 Cb medulloblastoma TTCCAGCTGC (4) 69.4 0.0694 Cb medulloblastoma GTGATTTTTA 4.6 0.0046 Cb medulloblastoma GTGGATTTTT (2) 4.6 0.0046 Cb medulloblastoma TCAGAGTTTT 4.6 0.0046 Cb medulloblastoma CAGTTCTGGG (4) 2.3 0.0023 Cb medulloblastoma GGAAACTGGG (8) 2.3 0.0023 Cb medulloblastoma GGAAAGGCTG (6) 2.3 0.0023 Cb medulloblastoma GGAGCTGAAG (5) 2.3 0.0023 Cb medulloblastoma GGAGGCTGAA (3) 2.3 0.0023 Cb medulloblastoma GGGGCCCTGG (11) 2.3 0.0023 Cb medulloblastoma GTGAATTTTA (5) 2.3 0.0023 P8 GC+1d culture TTCCAGCTGC (4) 25.1 0.0251 P8 GC+1d culture GTGGATTTTT (2) 9.1 0.0091 P8 GC+1d culture TCTAGATTAG (2) 4.6 0.0046 P8 GC+1d culture GAAGCTTGGG (3) 2.3 0.0023 P8 GC+1d culture AGGGCAGTCC (3) 1.1 0.0011 P8 GC+1d culture CTCCAGCTGC (3) 1.1 0.0011 P8 GC+1d culture GAAGCTGTGG (6) 1.1 0.0011 P8 GC+SHH+1d culture TTCCAGCTGC (4) 42.2 0.0422 P8 GC+SHH+1d culture GTGGATTTTT (2) 5.9 0.0059 P8 GC+SHH+1d culture TCTAGATTAG (2) 4.7 0.0047 P8 GC+SHH+1d culture GAAGCTTGGG (3) 3.5 0.0035 P8 GC+SHH+1d culture TTTTCATTGT (6) 2.3 0.0023 P8 GC+SHH+1d culture ATCCAGGGGT (4) 1.2 0.0012 3T3 fibroblasts TTCCAGCTGC (4) 52.6 0.0526 3T3 fibroblasts AGGTTACTTC (2) 3.5 0.0035 3T3 fibroblasts CTCCAGCTGC (3) 3.5 0.0035 3T3 fibroblasts GAAGCTGTGG (6) 3.5 0.0035 3T3 fibroblasts GAAGCTTGGG (3) 3.5 0.0035 3T3 fibroblasts GAGCCTGATC (2) 3.5 0.0035 3T3 fibroblasts GGAGGCTGAA (3) 3.5 0.0035 3T3 fibroblasts TCTAGATTAG (2) 3.5 0.0035 E15 cortex TTCCAGCTGC (4) 19.8 0.0198 E15 cortex GAAGCTGAAC (2) 4.9 0.0049 P1 cortex TTCCAGCTGC (4) 9.1 0.0091 P1 cortex CTCCAGCTGC (3) 4.5 0.0045 P1 cortex GAAGCTGAAC (2) 4.5 0.0045 P1 cortex GAAGCTTGGG (3) 4.5 0.0045 P1 cortex TCTAGATTAG (2) 4.5 0.0045 Hypothalamus TTCCAGCTGC (4) 56.1 0.0561 Hypothalamus GAGCTGAGAC (2) 10.9 0.0109 Hypothalamus GAAGCTGTGG (6) 3.6 0.0036 Hypothalamus GAAGCTGTTG (3) 3.6 0.0036 Hypothalamus TCTAGATTAG (2) 3.6 0.0036 Hypothalamus GGAAACTGGG (8) 1.8 0.0018 Hypothalamus GGAAAGGCTG (6) 1.8 0.0018 Hypothalamus GGAGCTGAAG (5) 1.8 0.0018 Hypothalamus GGAGGCTGAA (3) 1.8 0.0018 Hypothalamus GGGGCCCTGG (11) 1.8 0.0018 Hypothalamus GTGATTTTTA 1.8 0.0018 Hypothalamus TTTTCATTGT (6) 1.8 0.0018 E12.5 retina TTCCAGCTGC (4) 60.1 0.0601 E12.5 retina GAAGCTTGGG (3) 11.3 0.0113 E12.5 retina TCTAGATTAG (2) 9.4 0.0094 E12.5 retina AGGTTACTTC (2) 5.6 0.0056 E12.5 retina GTGGATTTTT (2) 5.6 0.0056 E12.5 retina GAAGCTGTGG (6) 3.8 0.0038 E12.5 retina TTTTCATTGT (6) 3.8 0.0038 E12.5 retina ATCCAGGGGT (4) 1.9 0.0019 E12.5 retina CTCCAGCTGC (3) 1.9 0.0019 E12.5 retina GAAGCTGTTG (3) 1.9 0.0019 E12.5 retina GTGATTTTTA 1.9 0.0019 E14.5 retina TTCCAGCTGC (4) 18.2 0.0182 E14.5 retina GAAGCTGAAC (2) 7.3 0.0073 E14.5 retina GTGGATTTTT (2) 5.5 0.0055 E14.5 retina TCTAGATTAG (2) 5.5 0.0055 E14.5 retina GTGATTTTTA 3.6 0.0036 E14.5 retina TTTTCATTGT (6) 3.6 0.0036 E14.5 retina CAGTCCTGGG (4) 1.8 0.0018 E14.5 retina GAGCCTGATC (2) 1.8 0.0018 E14.5 retina GGGGCCCTGG (11) 1.8 0.0018 E14.5 retina GTGAATTTTA (5) 1.8 0.0018 E16.5 retina TTCCAGCTGC (4) 34.4 0.0344 E16.5 retina TCTAGATTAG (2) 9.1 0.0091 E16.5 retina TTTTCATTGT (6) 5.4 0.0054 E16.5 retina ATCCAGGGGT (4) 3.6 0.0036 E16.5 retina GAAGCTGAAC (2) 1.8 0.0018 E16.5 retina GAAGCTGTGG (6) 1.8 0.0018 E16.5 retina GCTGCCTACA (4) 1.8 0.0018 E16.5 retina GTGGATTTTT (2) 1.8 0.0018 E18.5 retina TTCCAGCTGC (4) 69.1 0.0691 E18.5 retina GTGGATTTTT (2) 5.5 0.0055 E18.5 retina TCTAGATTAG (2) 5.5 0.0055 E18.5 retina GGAGCTGAAG (5) 3.6 0.0036 E18.5 retina AGGTTACTTC (2) 1.8 0.0018 E18.5 retina ATCCAGGGGT (4) 1.8 0.0018 E18.5 retina GAAGCTTGGG (3) 1.8 0.0018 E18.5 retina GTGAATTTTA (5) 1.8 0.0018 P0.5 retina TTCCAGCTGC (4) 58.9 0.0589 P0.5 retina GTGGATTTTT (2) 7.9 0.0079 P0.5 retina GAAGCTTGGG (3) 5.9 0.0059 P0.5 retina TCTAGATTAG (2) 5.9 0.0059 P0.5 retina CAGTCCTGGG (4) 2 0.002 P0.5 retina CAGTTCTGGG (4) 2 0.002 P0.5 retina GAAGCTGTGG (6) 2 0.002 P0.5 retina TCAGAGTTTT 2 0.002 P2.5 retina TTCCAGCTGC (4) 49.3 0.0493 P2.5 retina GTGGATTTTT (2) 5.3 0.0053 P2.5 retina GAAGCTTGGG (3) 3.5 0.0035 P2.5 retina TCTAGATTAG (2) 3.5 0.0035 P2.5 retina ATCCAGGGGT (4) 1.8 0.0018 P2.5 retina GAAGCTGAAC (2) 1.8 0.0018 P2.5 retina GGAAAGGCTG (6) 1.8 0.0018 P2.5 retina TTTTCATTGT (6) 1.8 0.0018 P4.5 retina TTCCAGCTGC (4) 49.5 0.0495 P4.5 retina GAAGCTTGGG (3) 4 0.004 P4.5 retina AGGGCAGTCC (3) 2 0.002 P4.5 retina GAAGCTGTGG (6) 2 0.002 P4.5 retina GGAAAGGCTG (6) 2 0.002 P4.5 retina GGGGCCCTGG (11) 2 0.002 P4.5 retina GTGGATTTTT (2) 2 0.002 P4.5 retina TCTAGATTAG (2) 2 0.002 P6.5 retina TTCCAGCTGC (4) 78.4 0.0784 P6.5 retina TCTAGATTAG (2) 6.7 0.0067 P6.5 retina GAAGCTTGGG (3) 3.3 0.0033 P6.5 retina GGAGGCTGAA (3) 3.3 0.0033 P6.5 retina GGAAACTGGG (8) 1.7 0.0017 P6.5 retina GGAAAGGCTG (6) 1.7 0.0017 P6.5 retina GTGGATTTTT (2) 1.7 0.0017 P6.5 retina TTTTCATTGT (6) 1.7 0.0017 P10.5 crx- retina TTCCAGCTGC (4) 44.6 0.0446 P10.5 crx- retina TCTAGATTAG (2) 14.9 0.0149 P10.5 crx- retina GGAGCTGAAG (5) 3.7 0.0037 P10.5 crx- retina GTGGATTTTT (2) 3.7 0.0037 P10.5 crx- retina GAAGCTGAAC (2) 1.9 0.0019 P10.5 crx- retina GAAGCTGTGG (6) 1.9 0.0019 P10.5 crx- retina GAAGCTTGGG (3) 1.9 0.0019 P10.5 crx- retina GAGCCTGATC (2) 1.9 0.0019 P10.5 crx- retina GCTGCCTACA (4) 1.9 0.0019 P10.5 crx- retina GGAAACTGGG (8) 1.9 0.0019 P10.5 crx- retina GGAGGCTGAA (3) 1.9 0.0019 P10.5 crx- retina TTTTCATTGT (6) 1.9 0.0019 P10.5 crx+ retina TTCCAGCTGC (4) 86.5 0.0865 P10.5 crx+ retina AGGTTACTTC (2) 5.8 0.0058 P10.5 crx+ retina GGAGCTGAAG (5) 3.8 0.0038 P10.5 crx+ retina CAGTCCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GCTGCCTACA (4) 1.9 0.0019 P10.5 crx+ retina GGAAACTGGG (8) 1.9 0.0019 P10.5 crx+ retina GGAAAGGCTG (6) 1.9 0.0019 P10.5 crx+ retina GGGGCCCTGG (11) 1.9 0.0019 P10.5 crx+ retina GTGGATTTTT (2) 1.9 0.0019 P10.5 crx+ retina TCTAGATTAG (2) 1.9 0.0019 Adult retinal TTCCAGCTGC (4) 85.2 0.0852 Adult retinal GGAAACTGGG (8) 5.6 0.0056 Adult retinal TCTAGATTAG (2) 3.7 0.0037 Adult retinal TTTTCATTGT (6) 3.7 0.0037 Adult retinal AGGTTACTTC (2) 1.9 0.0019 Adult retinal ATCCAGGGGT (4) 1.9 0.0019 Adult retinal GGGGCCCTGG (11) 1.9 0.0019 ONL TTCCAGCTGC (4) 40.2 0.0402 ONL GAAGCTGAAC (2) 21.1 0.0211 ONL TCTAGATTAG (2) 5.7 0.0057 ONL GAAGCTGTGG (6) 1.9 0.0019 ONL GGAGCTGAAG (5) 1.9 0.0019 ONL GTGGATTTTT (2) 1.9 0.0019