Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.316652	Hmgcr	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	13	13 49.0 cM	15357
Gene Ontology	biosynthesis | cholesterol biosynthesis | embryonic development | endoplasmic reticulum | hydroxymethylglutaryl-CoA reductase (NADPH) activity | hydroxymethylglutaryl-CoA reductase (NADPH) activity | integral to membrane | oxidoreductase activity
Human Homolog	HMGCR[3-hydroxy-3-methylglutaryl-Coenzyme A reductase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGTACAA 4.9 0.0049 P8 Cb GC AATGGCCCTG 1.6 0.0016 P8 Cb GC CTGCCGCGGC 1.6 0.0016 P8 Cb GC GAAGATTACT (2) 1.6 0.0016 Cb medulloblastoma GAAGATTACT (2) 4.6 0.0046 Cb medulloblastoma CTGCCGCGGC 2.3 0.0023 Cb medulloblastoma TTTTGTACAA 2.3 0.0023 P8 GC+1d culture TTTTGTACAA 6.8 0.0068 P8 GC+1d culture AATGGCCCTG 5.7 0.0057 P8 GC+1d culture CTGCCGCGGC 5.7 0.0057 P8 GC+1d culture TGGCTCCATC 2.3 0.0023 P8 GC+SHH+1d culture TTTTGTACAA 8.2 0.0082 P8 GC+SHH+1d culture CTGCCGCGGC 7 0.007 P8 GC+SHH+1d culture AATGGCCCTG 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCCATC 1.2 0.0012 3T3 fibroblasts AATGGCCCTG 3.5 0.0035 E15 cortex AATGGCCCTG 14.8 0.0148 E15 cortex ATCAGTGACA (2) 4.9 0.0049 P1 cortex TTTTGTACAA 9.1 0.0091 P1 cortex TGGCTCCATC 4.5 0.0045 Hypothalamus TTTTGTACAA 3.6 0.0036 Hypothalamus CTGCCGCGGC 1.8 0.0018 Hypothalamus GAAGATTACT (2) 1.8 0.0018 Hypothalamus TGGCTCCATC 1.8 0.0018 E12.5 retina CTGCCGCGGC 5.6 0.0056 E12.5 retina AATGGCCCTG 1.9 0.0019 E12.5 retina ATCAGTGACA (2) 1.9 0.0019 E12.5 retina TTTTGTACAA 1.9 0.0019 E14.5 retina TTTTGTACAA 14.6 0.0146 E14.5 retina CTGCCGCGGC 3.6 0.0036 E14.5 retina GGAGCCTCTT 3.6 0.0036 E14.5 retina TGGCTCCATC 1.8 0.0018 E16.5 retina TTTTGTACAA 10.9 0.0109 E16.5 retina CTGCCGCGGC 7.2 0.0072 E16.5 retina AATGGCCCTG 3.6 0.0036 E16.5 retina ATCAGTGACA (2) 3.6 0.0036 E16.5 retina GGAGCCTCTT 1.8 0.0018 E18.5 retina TTTTGTACAA 7.3 0.0073 E18.5 retina GAAGATTACT (2) 3.6 0.0036 E18.5 retina AATGGCCCTG 1.8 0.0018 P0.5 retina AATGGCCCTG 3.9 0.0039 P0.5 retina TGGCTCCATC 2 0.002 P2.5 retina TTTTGTACAA 3.5 0.0035 P4.5 retina GAAGATTACT (2) 5.9 0.0059 P4.5 retina TTTTGTACAA 4 0.004 P4.5 retina AATGGCCCTG 2 0.002 P4.5 retina TGGCTCCATC 2 0.002 P6.5 retina CTGCCGCGGC 3.3 0.0033 P6.5 retina GAAGATTACT (2) 1.7 0.0017 P10.5 crx- retina TTTTGTACAA 5.6 0.0056 P10.5 crx+ retina CTGCCGCGGC 5.8 0.0058 P10.5 crx+ retina GAAGATTACT (2) 3.8 0.0038 P10.5 crx+ retina AATGGCCCTG 1.9 0.0019 P10.5 crx+ retina ATCAGTGACA (2) 1.9 0.0019 P10.5 crx+ retina TGGCTCCATC 1.9 0.0019 Adult retinal TTTTGTACAA 5.6 0.0056 Adult retinal CTGCCGCGGC 3.7 0.0037 Adult retinal AATGGCCCTG 1.9 0.0019 Adult retinal TGGCTCCATC 1.9 0.0019 ONL TGGCTCCATC 7.7 0.0077 ONL AATGGCCCTG 1.9 0.0019 ONL CTGCCGCGGC 1.9 0.0019 ONL TTTTGTACAA 1.9 0.0019