| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATACTGAAGC GCGCCCAGCC TGTACAAAAA
| 47.3 | 0.0473 |
| Cb medulloblastoma | ATACTGAAGC CGCAAGGCCC
| 18.5 | 0.0185 |
| P8 GC+1d culture | AGCTCAGGGT (2) ATACTGAAGC
| 43.4 | 0.0434 |
| P8 GC+SHH+1d culture | AGCTCAGGGT (2) ATACTGAAGC GCGCCCAGCC TGTACAAAAA
| 44.5 | 0.0445 |
| 3T3 fibroblasts | AGCTCAGGGT (2) ATACTGAAGC
| 105.1 | 0.1051 |
| E15 cortex | AGCTCAGGGT (2) ATACTGAAGC GCGCCCAGCC
| 34.6 | 0.0346 |
| P1 cortex | ATACTGAAGC TGTACAAAAA
| 72.7 | 0.0727 |
| Hypothalamus | AGCTCAGGGT (2) ATACTGAAGC
| 10.9 | 0.0109 |
| E12.5 retina | ATACTGAAGC CGCAAGGCCC
| 48.8 | 0.0488 |
| E14.5 retina | AGCTCAGGGT (2) ATACTGAAGC CGCAAGGCCC TGTACAAAAA
| 56.4 | 0.0564 |
| E16.5 retina | AGCTCAGGGT (2) ATACTGAAGC GCGCCCAGCC
| 57.9 | 0.0579 |
| E18.5 retina | AGCTCAGGGT (2) ATACTGAAGC CGCAAGGCCC TGTACAAAAA
| 27.2 | 0.0272 |
| P0.5 retina | AGCTCAGGGT (2) ATACTGAAGC
| 117.8 | 0.1178 |
| P2.5 retina | AGCTCAGGGT (2) ATACTGAAGC
| 44 | 0.044 |
| P4.5 retina | ATACTGAAGC
| 17.8 | 0.0178 |
| P6.5 retina | AGCTCAGGGT (2) ATACTGAAGC
| 20 | 0.02 |
| P10.5 crx- retina | AGCTCAGGGT (2) ATACTGAAGC ATGTTGAAAA
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AGCTCAGGGT (2) ATACTGAAGC ATGTTGAAAA GCACCCAGCT
| 19.1 | 0.0191 |
| Adult retinal | AGCTCAGGGT (2) ATACTGAAGC ATGTTGAAAA
| 37 | 0.037 |
| ONL | ATACTGAAGC ATGTTGAAAA CGCAAGGCCC
| 15.2 | 0.0152 |