Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328239	Ube2n	ubiquitin-conjugating enzyme E2N	10		93765
Gene Ontology	ligase activity | protein binding | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism
Human Homolog	UBE2N[ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TTGAATGTAA (4) 4.9 0.0049 P8 Cb GC AACAATATTT (2) 1.6 0.0016 P8 Cb GC ACCAAAATCT (3) 1.6 0.0016 P8 Cb GC ATGGGGAAGG (5) 1.6 0.0016 P8 Cb GC CAAGGTTATG 1.6 0.0016 P8 Cb GC GTTAAAGTAC 1.6 0.0016 P8 Cb GC TGGTCATTGC 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TTGAATGTAA (4) 4.6 0.0046 Cb medulloblastoma CAAGGTTATG 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture GTTAAAGTAC 6.8 0.0068 P8 GC+1d culture TTGAATGTAA (4) 3.4 0.0034 P8 GC+1d culture AAGCATCAAT 1.1 0.0011 P8 GC+1d culture AGCAGAGGCT (2) 1.1 0.0011 P8 GC+1d culture ATGGGGAAGG (5) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture GTTAAAGTAC 8.2 0.0082 P8 GC+SHH+1d culture TTGAATGTAA (4) 3.5 0.0035 P8 GC+SHH+1d culture AGCAGAGGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCATCAAT 1.2 0.0012 P8 GC+SHH+1d culture ATGGGGAAGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCCTTTT (11) 1.2 0.0012 3T3 fibroblasts GAGCCAGAAG (3) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TTGAATGTAA (4) 9.1 0.0091 P1 cortex AAGCATCAAT 4.5 0.0045 P1 cortex ACCAAAATCT (3) 4.5 0.0045 P1 cortex GTTAAAGTAC 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus TTGAATGTAA (4) 3.6 0.0036 Hypothalamus ATGGGGAAGG (5) 1.8 0.0018 Hypothalamus TGGTCATTGC 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina ACCAAAATCT (3) 1.9 0.0019 E12.5 retina ATGGGGAAGG (5) 1.9 0.0019 E12.5 retina GTTAAAGTAC 1.9 0.0019 E12.5 retina TTTTCCTTTT (11) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AAGCATCAAT 1.8 0.0018 E14.5 retina ATGGGGAAGG (5) 1.8 0.0018 E14.5 retina GTTAAAGTAC 1.8 0.0018 E14.5 retina TTGAATGTAA (4) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina AACAATATTT (2) 3.6 0.0036 E16.5 retina GAGCCAGAAG (3) 3.6 0.0036 E16.5 retina TTGAATGTAA (4) 3.6 0.0036 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina AAGCATCAAT 1.8 0.0018 E18.5 retina TTGAATGTAA (4) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GTTAAAGTAC 7.9 0.0079 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TTGAATGTAA (4) 3.5 0.0035 P2.5 retina AAGCATCAAT 1.8 0.0018 P2.5 retina ACCAAAATCT (3) 1.8 0.0018 P2.5 retina ATGGGGAAGG (5) 1.8 0.0018 P2.5 retina GAGCCAGAAG (3) 1.8 0.0018 P2.5 retina TTTTCCTTTT (11) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina TTGAATGTAA (4) 4 0.004 P4.5 retina ATGGGGAAGG (5) 2 0.002 P4.5 retina TGGTCATTGC 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina TTGAATGTAA (4) 3.3 0.0033 P6.5 retina CAAGGTTATG 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GTTAAAGTAC 11.1 0.0111 P10.5 crx- retina AGCAGAGGCT (2) 1.9 0.0019 P10.5 crx- retina TTTTCCTTTT (11) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina TTGAATGTAA (4) 5.8 0.0058 P10.5 crx+ retina AACAATATTT (2) 1.9 0.0019 P10.5 crx+ retina ATGGGGAAGG (5) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal ATGGGGAAGG (5) 1.9 0.0019 Adult retinal GTTAAAGTAC 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AAGCATCAAT 1.9 0.0019 ONL GAGCCAGAAG (3) 1.9 0.0019