Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328673	Cct8	chaperonin subunit 8 (theta)	16		12469
Gene Ontology	ATP binding | protein folding
Human Homolog	CCT8[chaperonin containing TCP1, subunit 8 (theta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 123 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GCAAAACCAG (3) 14.7 0.0147 P8 Cb GC ATTTTTTTTC (20) 3.3 0.0033 P8 Cb GC AAAAAGAAAA (19) 1.6 0.0016 P8 Cb GC AGAAAGAAGA (6) 1.6 0.0016 P8 Cb GC AGATCCTTCC (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCAAAACCAG (3) 13.9 0.0139 Cb medulloblastoma ATTTTTTTTC (20) 9.2 0.0092 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma GTGTTGCCAG (3) 6.9 0.0069 Cb medulloblastoma AAAAAGAAAA (19) 2.3 0.0023 Cb medulloblastoma ATTTTTTTCT (11) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GCAAAACCAG (3) 24 0.024 P8 GC+1d culture ATTTTTTTTC (20) 3.4 0.0034 P8 GC+1d culture TGGGCCAAAC (2) 2.3 0.0023 P8 GC+1d culture AAAAAGAAAA (19) 1.1 0.0011 P8 GC+1d culture AGAAAGAAGA (6) 1.1 0.0011 P8 GC+1d culture CAGGCCTGTG (5) 1.1 0.0011 P8 GC+1d culture GTGTTGCCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GCAAAACCAG (3) 23.4 0.0234 P8 GC+SHH+1d culture AGAAAGAAGA (6) 4.7 0.0047 P8 GC+SHH+1d culture ATTTTTTTTC (20) 4.7 0.0047 P8 GC+SHH+1d culture AAAAAGAAAA (19) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTAAGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture GCCTTGAAAG (2) 1.2 0.0012 3T3 fibroblasts GCAAAACCAG (3) 31.5 0.0315 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GCAAAACCAG (3) 14.8 0.0148 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex ATTTTTTTTC (20) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex ATTTTTTTTC (20) 40.9 0.0409 P1 cortex AGAAAGAAGA (6) 9.1 0.0091 P1 cortex AGATCCTTCC (2) 4.5 0.0045 P1 cortex GCAAAACCAG (3) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GCAAAACCAG (3) 12.7 0.0127 Hypothalamus TGGGCCAAAC (2) 3.6 0.0036 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 Hypothalamus ATGATCTGAT (2) 1.8 0.0018 Hypothalamus ATTTTTTTTC (20) 1.8 0.0018 Hypothalamus GGAGGCCTCC (6) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCAAAACCAG (3) 20.7 0.0207 E12.5 retina ATTTTTTTTC (20) 9.4 0.0094 E12.5 retina AGAAAGAAGA (6) 3.8 0.0038 E12.5 retina GCCTTGAAAG (2) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GCAAAACCAG (3) 12.8 0.0128 E14.5 retina ATTTTTTTTC (20) 5.5 0.0055 E14.5 retina AAGATGAGAT (2) 1.8 0.0018 E14.5 retina ATGATCTGAT (2) 1.8 0.0018 E14.5 retina ATTTTTTTCT (11) 1.8 0.0018 E14.5 retina CAGGCCTGTG (5) 1.8 0.0018 E14.5 retina GCCTTGAAAG (2) 1.8 0.0018 E14.5 retina GTGTTGCCAG (3) 1.8 0.0018 E14.5 retina GTTTTAAGAA (4) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCAAAACCAG (3) 10.9 0.0109 E16.5 retina ATTTTTTTTC (20) 9.1 0.0091 E16.5 retina AAGATGAGAT (2) 3.6 0.0036 E16.5 retina AGAAAGAAGA (6) 3.6 0.0036 E16.5 retina AAAAAGAAAA (19) 1.8 0.0018 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina ATGATCTGAT (2) 1.8 0.0018 E16.5 retina GCCTTGAAAG (2) 1.8 0.0018 E16.5 retina GTGTTGCCAG (3) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GCAAAACCAG (3) 12.7 0.0127 E18.5 retina ATTTTTTTTC (20) 7.3 0.0073 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina GCCTTGAAAG (2) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GCAAAACCAG (3) 13.7 0.0137 P0.5 retina AGAAAGAAGA (6) 5.9 0.0059 P0.5 retina AAAAAGAAAA (19) 3.9 0.0039 P0.5 retina ATTTTTTTTC (20) 3.9 0.0039 P0.5 retina ATGATCTGAT (2) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAAAACCAG (3) 14.1 0.0141 P2.5 retina ATTTTTTTTC (20) 8.8 0.0088 P2.5 retina AAAAAGAAAA (19) 3.5 0.0035 P2.5 retina AGAAAGAAGA (6) 3.5 0.0035 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAAAACCAG (3) 13.9 0.0139 P4.5 retina AAAAAGAAAA (19) 4 0.004 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina GCCTTGAAAG (2) 4 0.004 P4.5 retina GGAGGCCTCC (6) 4 0.004 P4.5 retina ATTTTTTTCT (11) 2 0.002 P4.5 retina ATTTTTTTTC (20) 2 0.002 P4.5 retina CAGGCCTGTG (5) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GCAAAACCAG (3) 16.7 0.0167 P6.5 retina ATTTTTTTTC (20) 6.7 0.0067 P6.5 retina GCCTTGAAAG (2) 5 0.005 P6.5 retina AGAAAGAAGA (6) 3.3 0.0033 P6.5 retina ATGATCTGAT (2) 3.3 0.0033 P6.5 retina AAGATGAGAT (2) 1.7 0.0017 P6.5 retina GTGTTGCCAG (3) 1.7 0.0017 P10.5 crx- retina GCAAAACCAG (3) 27.9 0.0279 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina AGAAAGAAGA (6) 1.9 0.0019 P10.5 crx- retina GTGTTGCCAG (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GCAAAACCAG (3) 15.4 0.0154 P10.5 crx+ retina AGAAAGAAGA (6) 5.8 0.0058 P10.5 crx+ retina ATTTTTTTTC (20) 3.8 0.0038 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina AGATCCTTCC (2) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GCAAAACCAG (3) 7.4 0.0074 Adult retinal ATTTTTTTTC (20) 1.9 0.0019 Adult retinal CAGGCCTGTG (5) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GCAAAACCAG (3) 9.6 0.0096 ONL AAAAAGAAAA (19) 3.8 0.0038 ONL ATTTTTTTCT (11) 1.9 0.0019 ONL ATTTTTTTTC (20) 1.9 0.0019