Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32912	Psmb1	proteasome (prosome, macropain) subunit, beta type 1	17	17 8.25 cM	19170
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB1[proteasome (prosome, macropain) subunit, beta type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGCTGGTGA AGTGTGAGGA CAAATACCCA CGGGTCATAT CTGCAGCCTC GCACTTGCTG 43.9 0.0439 Cb medulloblastoma CAAATACCCA CGGGTCATAT 50.9 0.0509 P8 GC+1d culture AGCTGGTGAA (2) AGGCTGGTGA CAAATACCCA CGGGTCATAT CTGCAGCCTC 37.6 0.0376 P8 GC+SHH+1d culture AGGCTGGTGA AGTGTGAGGA CAAATACCCA CGGGTCATAT 43.3 0.0433 3T3 fibroblasts CGGGTCATAT 14 0.014 E15 cortex CGGGTCATAT 4.9 0.0049 P1 cortex CGGGTCATAT 4.5 0.0045 Hypothalamus AGGCTGGTGA CAAATACCCA CGGGTCATAT GGACAGTTGT (2) 68.8 0.0688 E12.5 retina CAAATACCCA CGGGTCATAT 50.7 0.0507 E14.5 retina AGCTGGTGAA (2) CAAATACCCA CGGGTCATAT GCACTTGCTG 27.2 0.0272 E16.5 retina CAAATACCCA CGGGTCATAT CTGCAGCCTC 27.1 0.0271 E18.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT GGACAGTTGT (2) 74.5 0.0745 P0.5 retina CAAATACCCA CGGGTCATAT 17.6 0.0176 P2.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT 51 0.051 P4.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT CTGCAGCCTC 53.5 0.0535 P6.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT 33.4 0.0334 P10.5 crx- retina CAAATACCCA CGGGTCATAT 35.3 0.0353 P10.5 crx+ retina AGTGTGAGGA CAAATACCCA CGGGTCATAT CTGCAGCCTC GCACTTGCTG 63.4 0.0634 Adult retinal CAAATACCCA CGGGTCATAT 22.3 0.0223 ONL AGTGTGAGGA CAAATACCCA CGGGTCATAT 15.3 0.0153