Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329243	1500001E21Rik	RIKEN cDNA 1500001E21 gene	17		75700
Mm.329243	Calm2	calmodulin 2	17		12314
Gene Ontology	calcium ion binding | cell cycle | cytoplasm | G-protein coupled receptor protein signaling pathway | plasma membrane | protein binding
Human Homolog	CALM2[calmodulin 2 (phosphorylase kinase, delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCACAACTTG (2) 220.2 0.2202 P8 Cb GC AGCAGGTTTT (2) 24.5 0.0245 P8 Cb GC GCACAACTTC (2) 9.8 0.0098 P8 Cb GC TTGTTGTTGA (2) 8.2 0.0082 P8 Cb GC CTGACAGTTC (2) 4.9 0.0049 P8 Cb GC GCGCAACTTG (2) 4.9 0.0049 P8 Cb GC TTTTCTTCCC (3) 3.3 0.0033 P8 Cb GC CAGGCCGCAC (2) 1.6 0.0016 P8 Cb GC GCACAACTTT (2) 1.6 0.0016 P8 Cb GC GCACGACTTG (2) 1.6 0.0016 P8 Cb GC TGATGACAAA (2) 1.6 0.0016 P8 Cb GC TTGTTGTTGG (2) 1.6 0.0016 P8 Cb GC TTTTCTTCCT (2) 1.6 0.0016 Cb medulloblastoma GCACAACTTG (2) 578.1 0.5781 Cb medulloblastoma AGCAGGTTTT (2) 25.4 0.0254 Cb medulloblastoma CTGACAGTTC (2) 16.2 0.0162 Cb medulloblastoma GCACGACTTG (2) 4.6 0.0046 Cb medulloblastoma GCACAACTTC (2) 2.3 0.0023 Cb medulloblastoma GCACAATTTG (2) 2.3 0.0023 Cb medulloblastoma GCGCAACTTG (2) 2.3 0.0023 Cb medulloblastoma TTTTCTTCCC (3) 2.3 0.0023 P8 GC+1d culture GCACAACTTG (2) 251.1 0.2511 P8 GC+1d culture AGCAGGTTTT (2) 6.8 0.0068 P8 GC+1d culture TTGTTGTTGA (2) 6.8 0.0068 P8 GC+1d culture CTGACAGTTC (2) 3.4 0.0034 P8 GC+1d culture GCACAACTTT (2) 2.3 0.0023 P8 GC+1d culture GCGCAACTTG (2) 2.3 0.0023 P8 GC+1d culture TGATGACAAA (2) 2.3 0.0023 P8 GC+1d culture GCACAACTTC (2) 1.1 0.0011 P8 GC+1d culture GCACGACTTG (2) 1.1 0.0011 P8 GC+SHH+1d culture GCACAACTTG (2) 265.8 0.2658 P8 GC+SHH+1d culture AGCAGGTTTT (2) 12.9 0.0129 P8 GC+SHH+1d culture CTGACAGTTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCACAACTGC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGCTTACTC (2) 2.3 0.0023 P8 GC+SHH+1d culture TTGTTGTTGA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTGTTGTTGG (2) 2.3 0.0023 P8 GC+SHH+1d culture TTTTCTTCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCCGCAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCACGACTTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGATGACAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTACTTCATC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTTCCT (2) 1.2 0.0012 3T3 fibroblasts GCACAACTTG (2) 73.6 0.0736 3T3 fibroblasts ACTCACCTGA (2) 3.5 0.0035 3T3 fibroblasts CAGGCCGCAC (2) 3.5 0.0035 E15 cortex GCACAACTTG (2) 197.9 0.1979 E15 cortex AGCAGGTTTT (2) 4.9 0.0049 E15 cortex GCACAACTTC (2) 4.9 0.0049 E15 cortex GCTGACCAAC (2) 4.9 0.0049 P1 cortex GCACAACTTG (2) 90.9 0.0909 P1 cortex AGCAGGTTTT (2) 13.6 0.0136 P1 cortex ACTCACCTGA (2) 4.5 0.0045 P1 cortex GCACAACTTT (2) 4.5 0.0045 P1 cortex TTGTTGTTGA (2) 4.5 0.0045 Hypothalamus GCACAACTTG (2) 231.8 0.2318 Hypothalamus TGTTCTTCCC (3) 19.9 0.0199 Hypothalamus TTGTTGTTGA (2) 19.9 0.0199 Hypothalamus AGCAGGTTTT (2) 16.3 0.0163 Hypothalamus GCACAACTTT (2) 3.6 0.0036 Hypothalamus TGGCTTACTC (2) 3.6 0.0036 Hypothalamus TTGTTGTTGG (2) 3.6 0.0036 Hypothalamus TGATGACAAA (2) 1.8 0.0018 Hypothalamus TTACTTCATC (2) 1.8 0.0018 Hypothalamus TTTTCTTCCT (2) 1.8 0.0018 E12.5 retina GCACAACTTG (2) 95.7 0.0957 E12.5 retina AGCAGGTTTT (2) 3.8 0.0038 E12.5 retina TTGTTGTTGG (2) 3.8 0.0038 E12.5 retina GCACAACTTC (2) 1.9 0.0019 E12.5 retina TGATGACAAA (2) 1.9 0.0019 E14.5 retina GCACAACTTG (2) 133 0.133 E14.5 retina TTGTTGTTGA (2) 9.1 0.0091 E14.5 retina CTGACAGTTC (2) 3.6 0.0036 E14.5 retina AGCAGGTTTT (2) 1.8 0.0018 E14.5 retina TGATGACAAA (2) 1.8 0.0018 E16.5 retina GCACAACTTG (2) 161.2 0.1612 E16.5 retina TTGTTGTTGA (2) 12.7 0.0127 E16.5 retina CTGACAGTTC (2) 3.6 0.0036 E16.5 retina GCACAACTTC (2) 3.6 0.0036 E16.5 retina GCTGACCAAC (2) 3.6 0.0036 E16.5 retina TTTTCTTCCC (3) 3.6 0.0036 E16.5 retina AGCAGGTTTT (2) 1.8 0.0018 E16.5 retina TGATGACAAA (2) 1.8 0.0018 E16.5 retina TGGCTTACTC (2) 1.8 0.0018 E16.5 retina TTACTTCATC (2) 1.8 0.0018 E18.5 retina GCACAACTTG (2) 243.7 0.2437 E18.5 retina AGCAGGTTTT (2) 20 0.02 E18.5 retina GCACAACTTC (2) 3.6 0.0036 E18.5 retina GCACGACTTG (2) 3.6 0.0036 E18.5 retina TTGTTGTTGA (2) 3.6 0.0036 E18.5 retina GCACAATTTG (2) 1.8 0.0018 E18.5 retina TGATGACAAA (2) 1.8 0.0018 E18.5 retina TTGTTGTTGG (2) 1.8 0.0018 P0.5 retina GCACAACTTG (2) 217.8 0.2178 P0.5 retina AGCAGGTTTT (2) 5.9 0.0059 P0.5 retina ACTCACCTGA (2) 2 0.002 P0.5 retina CAGGCCGCAC (2) 2 0.002 P0.5 retina CTGACAGTTC (2) 2 0.002 P0.5 retina GCACAACTTT (2) 2 0.002 P0.5 retina GCGCAACTTG (2) 2 0.002 P0.5 retina TTGTTGTTGA (2) 2 0.002 P2.5 retina GCACAACTTG (2) 172.5 0.1725 P2.5 retina AGCAGGTTTT (2) 12.3 0.0123 P2.5 retina TTGTTGTTGA (2) 8.8 0.0088 P2.5 retina CTGACAGTTC (2) 3.5 0.0035 P2.5 retina GCGCAACTTG (2) 1.8 0.0018 P2.5 retina GCTGACCAAC (2) 1.8 0.0018 P2.5 retina TGATGACAAA (2) 1.8 0.0018 P2.5 retina TGGCTTACTC (2) 1.8 0.0018 P2.5 retina TTGTTGTTGG (2) 1.8 0.0018 P4.5 retina GCACAACTTG (2) 194.2 0.1942 P4.5 retina AGCAGGTTTT (2) 11.9 0.0119 P4.5 retina TGATGACAAA (2) 4 0.004 P4.5 retina CTGACAGTTC (2) 2 0.002 P4.5 retina GCACGACTTG (2) 2 0.002 P4.5 retina TTACTTCATC (2) 2 0.002 P4.5 retina TTGTTGTTGA (2) 2 0.002 P6.5 retina GCACAACTTG (2) 143.4 0.1434 P6.5 retina CTGACAGTTC (2) 5 0.005 P6.5 retina AGCAGGTTTT (2) 1.7 0.0017 P6.5 retina GCACAACTTC (2) 1.7 0.0017 P6.5 retina TGATGACAAA (2) 1.7 0.0017 P6.5 retina TTGTTGTTGG (2) 1.7 0.0017 P10.5 crx- retina GCACAACTTG (2) 206.2 0.2062 P10.5 crx- retina TTGTTGTTGA (2) 11.1 0.0111 P10.5 crx- retina AGCAGGTTTT (2) 5.6 0.0056 P10.5 crx- retina TGGCTTACTC (2) 1.9 0.0019 P10.5 crx- retina TTACTTCATC (2) 1.9 0.0019 P10.5 crx+ retina GCACAACTTG (2) 288.4 0.2884 P10.5 crx+ retina AGCAGGTTTT (2) 17.3 0.0173 P10.5 crx+ retina TTGTTGTTGA (2) 7.7 0.0077 P10.5 crx+ retina GCACAACTTC (2) 3.8 0.0038 P10.5 crx+ retina CAGGCCGCAC (2) 1.9 0.0019 P10.5 crx+ retina GCACGACTTG (2) 1.9 0.0019 Adult retinal GCACAACTTG (2) 94.4 0.0944 Adult retinal TTGTTGTTGG (2) 5.6 0.0056 Adult retinal AGCAGGTTTT (2) 3.7 0.0037 Adult retinal GCACAACTTC (2) 1.9 0.0019 Adult retinal GCACAACTTT (2) 1.9 0.0019 Adult retinal GCACAATTTG (2) 1.9 0.0019 Adult retinal TTGTTGTTGA (2) 1.9 0.0019 Adult retinal TTTTCTTCCT (2) 1.9 0.0019 ONL GCACAACTTG (2) 40.2 0.0402 ONL GCACAACTGC (2) 1.9 0.0019