Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329616	6430591O13Rik	RIKEN cDNA 6430591O13 gene	19		320459
Mm.329616	Nrxn2	neurexin II	19		18190
Gene Ontology	calcium channel regulator activity | neurotransmitter secretion | presynaptic membrane | synaptic transmission | synaptogenesis
Human Homolog	NRXN2[neurexin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAAAAAA (27) 9.8 0.0098 Cb medulloblastoma AAGAAAAAAA (27) 11.6 0.0116 Cb medulloblastoma TACAAGTACC (4) 2.3 0.0023 P8 GC+1d culture TACAAGTACC (4) 6.8 0.0068 P8 GC+1d culture AAGAAAAAAA (27) 4.6 0.0046 P8 GC+1d culture GGAGAGAGAA (11) 1.1 0.0011 P8 GC+SHH+1d culture AAGAAAAAAA (27) 3.5 0.0035 P8 GC+SHH+1d culture GGAGAGAGAA (11) 1.2 0.0012 E15 cortex AAGAAAAAAA (27) 24.7 0.0247 P1 cortex TACAAGTACC (4) 13.6 0.0136 P1 cortex AAGAAAAAAA (27) 9.1 0.0091 Hypothalamus CTAAAATCAC (3) 3.6 0.0036 Hypothalamus AAGAAAAAAA (27) 1.8 0.0018 Hypothalamus TACAAGTACC (4) 1.8 0.0018 E12.5 retina AAGAAAAAAA (27) 1.9 0.0019 E12.5 retina GGAGAGAGAA (11) 1.9 0.0019 E14.5 retina AAGAAAAAAA (27) 1.8 0.0018 E16.5 retina AAGAAAAAAA (27) 1.8 0.0018 E16.5 retina TACAAGTACC (4) 1.8 0.0018 E18.5 retina AAGAAAAAAA (27) 5.5 0.0055 E18.5 retina CTAAAATCAC (3) 1.8 0.0018 P0.5 retina AAGAAAAAAA (27) 2 0.002 P2.5 retina AAGAAAAAAA (27) 5.3 0.0053 P2.5 retina GGAGAGAGAA (11) 1.8 0.0018 P4.5 retina AAGAAAAAAA (27) 5.9 0.0059 P4.5 retina GGAGAGAGAA (11) 2 0.002 P6.5 retina AAGAAAAAAA (27) 3.3 0.0033 P10.5 crx- retina AAGAAAAAAA (27) 1.9 0.0019 P10.5 crx- retina CTAAAATCAC (3) 1.9 0.0019 P10.5 crx- retina TACAAGTACC (4) 1.9 0.0019 P10.5 crx+ retina TACAAGTACC (4) 3.8 0.0038 P10.5 crx+ retina AAGAAAAAAA (27) 1.9 0.0019 Adult retinal TACAAGTACC (4) 3.7 0.0037 Adult retinal AAGAAAAAAA (27) 1.9 0.0019 ONL AAGAAAAAAA (27) 3.8 0.0038 ONL CTAAAATCAC (3) 1.9 0.0019