Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330428	Cd44	CD44 antigen	2	2 56.0 cM	12505
Gene Ontology	cell adhesion | external side of plasma membrane | hyaluronic acid binding | integral to membrane | membrane | protein binding | receptor activity | ureteric bud branching
Human Homolog	CD44[CD44 antigen (homing function and Indian blood group system)] | CD44[CD44 antigen (homing function and Indian blood group system)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCTCCTGA (4) 8.2 0.0082 P8 Cb GC ATGATAATGA (3) 1.6 0.0016 Cb medulloblastoma TCCATATTTT (3) 4.6 0.0046 Cb medulloblastoma CCCCTCCTGA (4) 2.3 0.0023 P8 GC+1d culture CCCCTCCTGA (4) 5.7 0.0057 P8 GC+1d culture TCCATATTTT (3) 2.3 0.0023 P8 GC+1d culture ATGATAATGA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCCCTCCTGA (4) 7 0.007 P8 GC+SHH+1d culture TCCATATTTT (3) 4.7 0.0047 P8 GC+SHH+1d culture AAGATTGGGG 1.2 0.0012 3T3 fibroblasts CCCCTCCTGA (4) 14 0.014 3T3 fibroblasts AAGATTGGGG 3.5 0.0035 E15 cortex CCCCTCCTGA (4) 9.9 0.0099 P1 cortex ATGATAATGA (3) 4.5 0.0045 P1 cortex CCCCTCCTGA (4) 4.5 0.0045 P1 cortex TCCATATTTT (3) 4.5 0.0045 Hypothalamus ATTTTGTAAA (4) 3.6 0.0036 Hypothalamus ATGATAATGA (3) 1.8 0.0018 Hypothalamus TCCATATTTT (3) 1.8 0.0018 E12.5 retina CCCCTCCTGA (4) 11.3 0.0113 E12.5 retina ATGATAATGA (3) 1.9 0.0019 E12.5 retina GCTGATCTGT 1.9 0.0019 E14.5 retina CCCCTCCTGA (4) 5.5 0.0055 E14.5 retina TCCATATTTT (3) 1.8 0.0018 E16.5 retina ATTTTGTAAA (4) 1.8 0.0018 E16.5 retina CCCCTCCTGA (4) 1.8 0.0018 E16.5 retina TCCATATTTT (3) 1.8 0.0018 E18.5 retina CCCCTCCTGA (4) 5.5 0.0055 E18.5 retina ATGATAATGA (3) 1.8 0.0018 P0.5 retina CCCCTCCTGA (4) 15.7 0.0157 P2.5 retina ATTTTGTAAA (4) 1.8 0.0018 P2.5 retina CCCCTCCTGA (4) 1.8 0.0018 P2.5 retina TCCATATTTT (3) 1.8 0.0018 P4.5 retina CCCCTCCTGA (4) 7.9 0.0079 P4.5 retina TCCATATTTT (3) 4 0.004 P6.5 retina CCCCTCCTGA (4) 1.7 0.0017 P10.5 crx- retina CCCCTCCTGA (4) 13 0.013 P10.5 crx+ retina CCCCTCCTGA (4) 9.6 0.0096 P10.5 crx+ retina TCCATATTTT (3) 1.9 0.0019 Adult retinal AAGATTGGGG 1.9 0.0019 ONL GCTGATCTGT 3.8 0.0038 ONL TCCATATTTT (3) 3.8 0.0038 ONL ATTTTGTAAA (4) 1.9 0.0019 ONL CCCCTCCTGA (4) 1.9 0.0019