Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330428	Cd44	CD44 antigen	2	2 56.0 cM	12505
Gene Ontology	cell adhesion | external side of plasma membrane | hyaluronic acid binding | integral to membrane | membrane | protein binding | receptor activity | ureteric bud branching
Human Homolog	CD44[CD44 antigen (homing function and Indian blood group system)] | CD44[CD44 antigen (homing function and Indian blood group system)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma TCCATATTTT (2) 4.6 0.0046 P8 GC+1d culture TCCATATTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TCCATATTTT (2) 4.7 0.0047 P8 GC+SHH+1d culture AAGATTGGGG 1.2 0.0012 3T3 fibroblasts AAGATTGGGG 3.5 0.0035 P1 cortex TCCATATTTT (2) 4.5 0.0045 Hypothalamus ATTTTGTAAA (2) 3.6 0.0036 Hypothalamus TCCATATTTT (2) 1.8 0.0018 E14.5 retina TCCATATTTT (2) 1.8 0.0018 E16.5 retina ATTTTGTAAA (2) 1.8 0.0018 E16.5 retina TCCATATTTT (2) 1.8 0.0018 P2.5 retina ATTTTGTAAA (2) 1.8 0.0018 P2.5 retina TCCATATTTT (2) 1.8 0.0018 P4.5 retina TCCATATTTT (2) 4 0.004 P10.5 crx+ retina TCCATATTTT (2) 1.9 0.0019 Adult retinal AAGATTGGGG 1.9 0.0019 ONL TCCATATTTT (2) 3.8 0.0038 ONL ATTTTGTAAA (2) 1.9 0.0019