Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330690	C80425	expressed sequence C80425	2		96999
Mm.330690	Eif2s2	eukaryotic translation initiation factor 2, subunit 2 (beta)	2	2 90.0 cM	67204
Gene Ontology	protein biosynthesis | translation initiation factor activity | translational initiation
Human Homolog	EIF2S2[eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATAAAAA (28) 6.5 0.0065 P8 Cb GC CCGGTCACCG (3) 6.5 0.0065 P8 Cb GC TCCGGGGACG (3) 6.5 0.0065 P8 Cb GC ATCCCCAATG (4) 1.6 0.0016 P8 Cb GC ATGCCCAATG (3) 1.6 0.0016 P8 Cb GC CAAATCTCCA (3) 1.6 0.0016 P8 Cb GC CACATATGGT (4) 1.6 0.0016 Cb medulloblastoma AAAATAAAAA (28) 9.2 0.0092 Cb medulloblastoma AATCCCCAAT (3) 2.3 0.0023 Cb medulloblastoma AGAGAAAAGA (4) 2.3 0.0023 Cb medulloblastoma ATGCCCAATG (3) 2.3 0.0023 Cb medulloblastoma CAAATCTCCA (3) 2.3 0.0023 Cb medulloblastoma GAAAAGAAAA (12) 2.3 0.0023 Cb medulloblastoma GTGGCATATA (13) 2.3 0.0023 Cb medulloblastoma TCCGGGGACG (3) 2.3 0.0023 P8 GC+1d culture AAAATAAAAA (28) 8 0.008 P8 GC+1d culture CCGGTCACCG (3) 3.4 0.0034 P8 GC+1d culture TCCGGGGACG (3) 3.4 0.0034 P8 GC+1d culture TGAATAGAAC (4) 2.3 0.0023 P8 GC+1d culture CACATATGGT (4) 1.1 0.0011 P8 GC+SHH+1d culture TCCGGGGACG (3) 9.4 0.0094 P8 GC+SHH+1d culture AAAATAAAAA (28) 5.9 0.0059 P8 GC+SHH+1d culture GAAAAGAAAA (12) 4.7 0.0047 P8 GC+SHH+1d culture CCGGTCACCG (3) 2.3 0.0023 P8 GC+SHH+1d culture ATCCCCAATG (4) 1.2 0.0012 P8 GC+SHH+1d culture CACATATGGT (4) 1.2 0.0012 P8 GC+SHH+1d culture TAAACCAACA (2) 1.2 0.0012 3T3 fibroblasts CCGGTCACCG (3) 45.6 0.0456 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCAGTGAGCG (2) 7 0.007 3T3 fibroblasts TCCGGGGACG (3) 7 0.007 3T3 fibroblasts ATGCCCAATG (3) 3.5 0.0035 E15 cortex CCGGTCACCG (3) 19.8 0.0198 E15 cortex TCCGGGGACG (3) 14.8 0.0148 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTGGCATATA (13) 4.9 0.0049 P1 cortex AAAATAAAAA (28) 9.1 0.0091 P1 cortex ATCCCCAATG (4) 4.5 0.0045 Hypothalamus CCGGTCACCG (3) 7.2 0.0072 Hypothalamus AGAGAAAAGA (4) 5.4 0.0054 Hypothalamus CACATATGGT (4) 5.4 0.0054 Hypothalamus AAAATAAAAA (28) 3.6 0.0036 Hypothalamus GCTGTAGTTC (5) 3.6 0.0036 Hypothalamus TCCGGGGACG (3) 3.6 0.0036 Hypothalamus ATCCCCAATG (4) 1.8 0.0018 Hypothalamus TGAATAGAAC (4) 1.8 0.0018 E12.5 retina CACATATGGT (4) 13.1 0.0131 E12.5 retina TCCGGGGACG (3) 9.4 0.0094 E12.5 retina AAAATAAAAA (28) 5.6 0.0056 E12.5 retina ATCCCCAATG (4) 3.8 0.0038 E12.5 retina AATCCCCAAT (3) 1.9 0.0019 E12.5 retina CCGGTCACCG (3) 1.9 0.0019 E12.5 retina GGCAGAGGTA (3) 1.9 0.0019 E14.5 retina AAAATAAAAA (28) 14.6 0.0146 E14.5 retina CACATATGGT (4) 10.9 0.0109 E14.5 retina ATCCCCAATG (4) 5.5 0.0055 E14.5 retina CCGGTCACCG (3) 5.5 0.0055 E14.5 retina TCCGGGGACG (3) 5.5 0.0055 E14.5 retina GCTGTAGTTC (5) 1.8 0.0018 E16.5 retina TCCGGGGACG (3) 12.7 0.0127 E16.5 retina AAAATAAAAA (28) 10.9 0.0109 E16.5 retina ATCCCCAATG (4) 9.1 0.0091 E16.5 retina CACATATGGT (4) 5.4 0.0054 E16.5 retina CCGGTCACCG (3) 5.4 0.0054 E16.5 retina GCAGTGAGCG (2) 1.8 0.0018 E16.5 retina GTGGCATATA (13) 1.8 0.0018 E18.5 retina AAAATAAAAA (28) 16.4 0.0164 E18.5 retina CACATATGGT (4) 12.7 0.0127 E18.5 retina TCCGGGGACG (3) 5.5 0.0055 E18.5 retina ATCCCCAATG (4) 3.6 0.0036 E18.5 retina CAAATCTCCA (3) 1.8 0.0018 E18.5 retina CCGGTCACCG (3) 1.8 0.0018 P0.5 retina CCGGTCACCG (3) 11.8 0.0118 P0.5 retina AAAATAAAAA (28) 5.9 0.0059 P0.5 retina CACATATGGT (4) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TCCGGGGACG (3) 3.9 0.0039 P0.5 retina ATCCCCAATG (4) 2 0.002 P2.5 retina AAAATAAAAA (28) 19.4 0.0194 P2.5 retina TCCGGGGACG (3) 7 0.007 P2.5 retina ATCCCCAATG (4) 3.5 0.0035 P2.5 retina CACATATGGT (4) 3.5 0.0035 P2.5 retina CCGGTCACCG (3) 3.5 0.0035 P2.5 retina GAAAAGAAAA (12) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTGGCATATA (13) 1.8 0.0018 P4.5 retina AAAATAAAAA (28) 21.8 0.0218 P4.5 retina CCGGTCACCG (3) 4 0.004 P4.5 retina ATCCCCAATG (4) 2 0.002 P4.5 retina CACATATGGT (4) 2 0.002 P4.5 retina GAAAAGAAAA (12) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCCGGGGACG (3) 2 0.002 P6.5 retina AAAATAAAAA (28) 11.7 0.0117 P6.5 retina TCCGGGGACG (3) 8.3 0.0083 P6.5 retina CACATATGGT (4) 5 0.005 P6.5 retina ATCCCCAATG (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCAGTGAGCG (2) 1.7 0.0017 P6.5 retina GGCAGAGGTA (3) 1.7 0.0017 P6.5 retina GTGGCATATA (13) 1.7 0.0017 P10.5 crx- retina ATGCCCAATG (3) 13 0.013 P10.5 crx- retina CACATATGGT (4) 5.6 0.0056 P10.5 crx- retina AAAATAAAAA (28) 3.7 0.0037 P10.5 crx- retina CCGGTCACCG (3) 1.9 0.0019 P10.5 crx- retina GGCAGAGGTA (3) 1.9 0.0019 P10.5 crx- retina GTGGCATATA (13) 1.9 0.0019 P10.5 crx- retina TAAACCAACA (2) 1.9 0.0019 P10.5 crx- retina TCCGGGGACG (3) 1.9 0.0019 P10.5 crx- retina TGAATAGAAC (4) 1.9 0.0019 P10.5 crx+ retina ATGCCCAATG (3) 7.7 0.0077 P10.5 crx+ retina CACATATGGT (4) 3.8 0.0038 P10.5 crx+ retina AAAATAAAAA (28) 1.9 0.0019 P10.5 crx+ retina GTGGCATATA (13) 1.9 0.0019 P10.5 crx+ retina TCCGGGGACG (3) 1.9 0.0019 Adult retinal CCGGTCACCG (3) 3.7 0.0037 Adult retinal AAAATAAAAA (28) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AAAATAAAAA (28) 11.5 0.0115 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGAGAAAGAA (10) 3.8 0.0038