Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33263	5430410E06Rik	RIKEN cDNA 5430410E06 gene	17		71413
Mm.33263	Ssfa1	sperm specific antigen 1	15		20826
Mm.33263	H2-D1	histocompatibility 2, D region locus 1	17	17 19.09 cM	14964
Mm.33263	H2-L	histocompatibility 2, D region	17	17 19.13 cM	14980
Mm.33263	H2-Q2	histocompatibility 2, Q region locus 2	17	17 19.15 cM	15013
Gene Ontology	defense response | integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTGAGAAT (7) 4.9 0.0049 P8 Cb GC GTGGGTCACA (7) 1.6 0.0016 Cb medulloblastoma GATTGAGAAT (7) 16.2 0.0162 Cb medulloblastoma GTGGGTCACA (7) 6.9 0.0069 P8 GC+1d culture GATTGAGAAT (7) 19.4 0.0194 P8 GC+1d culture GTGGGTCACA (7) 2.3 0.0023 P8 GC+SHH+1d culture GATTGAGAAT (7) 19.9 0.0199 P8 GC+SHH+1d culture GTGGGTCACA (7) 2.3 0.0023 3T3 fibroblasts GTGGGCTCAC (6) 3.5 0.0035 E15 cortex GTGGGCTCAC (6) 9.9 0.0099 E15 cortex GTGGGTCACA (7) 9.9 0.0099 Hypothalamus GATTGAGAAT (7) 3.6 0.0036 Hypothalamus GTGGGCTCAC (6) 3.6 0.0036 Hypothalamus GTGGGTCACA (7) 1.8 0.0018 E12.5 retina GTGGGTCACA (7) 3.8 0.0038 E12.5 retina GTGGGCTCAC (6) 1.9 0.0019 E14.5 retina GATTGAGAAT (7) 1.8 0.0018 E14.5 retina GTGGGTCACA (7) 1.8 0.0018 E16.5 retina GTGGGCTCAC (6) 5.4 0.0054 E16.5 retina GTGGGTCACA (7) 3.6 0.0036 E16.5 retina GATTGAGAAT (7) 1.8 0.0018 E18.5 retina GTGGGTCACA (7) 7.3 0.0073 E18.5 retina GATTGAGAAT (7) 1.8 0.0018 P0.5 retina GTGGGCTCAC (6) 3.9 0.0039 P0.5 retina GATTGAGAAT (7) 2 0.002 P0.5 retina GTGGGTCACA (7) 2 0.002 P2.5 retina GTGGGCTCAC (6) 5.3 0.0053 P2.5 retina GTGGGTCACA (7) 3.5 0.0035 P2.5 retina GATTGAGAAT (7) 1.8 0.0018 P4.5 retina GTGGGCTCAC (6) 7.9 0.0079 P4.5 retina GATTGAGAAT (7) 4 0.004 P6.5 retina GTGGGCTCAC (6) 3.3 0.0033 P10.5 crx- retina GATTGAGAAT (7) 5.6 0.0056 P10.5 crx- retina GTGGGCTCAC (6) 5.6 0.0056 P10.5 crx+ retina GATTGAGAAT (7) 7.7 0.0077 P10.5 crx+ retina GTGGGCTCAC (6) 5.8 0.0058 Adult retinal GATTGAGAAT (7) 7.4 0.0074 Adult retinal GTGGGCTCAC (6) 7.4 0.0074 Adult retinal GTGGGTCACA (7) 5.6 0.0056 ONL GTGGGTCACA (7) 9.6 0.0096 ONL GTGGGCTCAC (6) 5.7 0.0057 ONL GATTGAGAAT (7) 1.9 0.0019