Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332810	Gpx4	glutathione peroxidase 4	10	10 C1 (10 43.0 cM)	14779
Gene Ontology	cytosol | development | establishment and/or maintenance of chromatin architecture | glutathione peroxidase activity | glutathione peroxidase activity | mitochondrion | nuclear membrane | nucleus | oxidoreductase activity | peroxidase activity | response to oxidative stress | spermatogenesis
Human Homolog	GPX4[glutathione peroxidase 4 (phospholipid hydroperoxidase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTCTGCC (3) 22.8 0.0228 P8 Cb GC TGTAGACGGA (3) 14.7 0.0147 P8 Cb GC GAGGAGCCCC (3) 3.3 0.0033 P8 Cb GC CTGGGAAATG (2) 1.6 0.0016 Cb medulloblastoma AAGGTCTGCC (3) 71.7 0.0717 Cb medulloblastoma TGTAGACGGA (3) 16.2 0.0162 Cb medulloblastoma GAGGAGCCCC (3) 9.2 0.0092 Cb medulloblastoma CCCGATATGC 2.3 0.0023 Cb medulloblastoma CTGGGAAATG (2) 2.3 0.0023 Cb medulloblastoma GTCTGGCTGG (12) 2.3 0.0023 P8 GC+1d culture AAGGTCTGCC (3) 50.2 0.0502 P8 GC+1d culture TGTAGACGGA (3) 12.6 0.0126 P8 GC+1d culture AAGGCTGCCT (4) 2.3 0.0023 P8 GC+1d culture GAGGGAGCCC (10) 1.1 0.0011 P8 GC+SHH+1d culture AAGGTCTGCC (3) 46.8 0.0468 P8 GC+SHH+1d culture TGTAGACGGA (3) 16.4 0.0164 P8 GC+SHH+1d culture CTGGGAAATA (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAGTCTGCC (2) 1.2 0.0012 P8 GC+SHH+1d culture AAGGTTTGCC 1.2 0.0012 P8 GC+SHH+1d culture AAGTTTTGCC 1.2 0.0012 P8 GC+SHH+1d culture GAAGTCTGCC (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGCCCC (3) 1.2 0.0012 3T3 fibroblasts AAGGTCTGCC (3) 115.7 0.1157 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AAAGGTCTGC 3.5 0.0035 3T3 fibroblasts AAAGTCTGCC (2) 3.5 0.0035 3T3 fibroblasts TGTAGACGGA (3) 3.5 0.0035 E15 cortex AAGGTCTGCC (3) 14.8 0.0148 E15 cortex TGTAGACGGA (3) 14.8 0.0148 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTCTGGCTGG (12) 4.9 0.0049 P1 cortex AAGGTCTGCC (3) 9.1 0.0091 P1 cortex TGTAGACGGA (3) 4.5 0.0045 Hypothalamus TGTAGACGGA (3) 36.2 0.0362 Hypothalamus AAGGTCTGCC (3) 29 0.029 Hypothalamus GAGGAGCCCC (3) 18.1 0.0181 Hypothalamus TACAGCAAGA (3) 7.2 0.0072 Hypothalamus GTCTGGCTGG (12) 3.6 0.0036 Hypothalamus AAGGCTGCCT (4) 1.8 0.0018 Hypothalamus CTGGGAAATA (3) 1.8 0.0018 Hypothalamus CTGGGAAATG (2) 1.8 0.0018 E12.5 retina AAGGTCTGCC (3) 22.5 0.0225 E12.5 retina TGTAGACGGA (3) 20.7 0.0207 E12.5 retina CCCGATATGC 1.9 0.0019 E12.5 retina GAGGGAGCCC (10) 1.9 0.0019 E14.5 retina TGTAGACGGA (3) 16.4 0.0164 E14.5 retina CTGGGAAATA (3) 5.5 0.0055 E14.5 retina AAAGGTCTGC 3.6 0.0036 E14.5 retina AAGGTCTGCC (3) 3.6 0.0036 E14.5 retina GAGGAGCCCC (3) 3.6 0.0036 E14.5 retina AAAGTCTGCC (2) 1.8 0.0018 E14.5 retina AAGGCTGCCT (4) 1.8 0.0018 E14.5 retina CCCGATATGC 1.8 0.0018 E14.5 retina CTGGGAAATG (2) 1.8 0.0018 E14.5 retina CTGGGAGATG (6) 1.8 0.0018 E16.5 retina TGTAGACGGA (3) 21.7 0.0217 E16.5 retina AAGGTCTGCC (3) 14.5 0.0145 E16.5 retina CTGGGAAATA (3) 3.6 0.0036 E16.5 retina GAGGAGCCCC (3) 1.8 0.0018 E18.5 retina TGTAGACGGA (3) 45.5 0.0455 E18.5 retina AAGGTCTGCC (3) 25.5 0.0255 E18.5 retina AAGGTTTGCC 1.8 0.0018 E18.5 retina CCCGATATGC 1.8 0.0018 E18.5 retina CTGGGAAATA (3) 1.8 0.0018 E18.5 retina GAGGAGCCCC (3) 1.8 0.0018 P0.5 retina AAGGTCTGCC (3) 43.2 0.0432 P0.5 retina TGTAGACGGA (3) 23.6 0.0236 P0.5 retina AAGGCTGCCT (4) 3.9 0.0039 P0.5 retina CTGGGAAATA (3) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CTGGGAAATG (2) 2 0.002 P0.5 retina GAAGTCTGCC (4) 2 0.002 P0.5 retina GAGGGAGCCC (10) 2 0.002 P2.5 retina TGTAGACGGA (3) 24.6 0.0246 P2.5 retina AAGGTCTGCC (3) 14.1 0.0141 P2.5 retina GAGGGAGCCC (10) 3.5 0.0035 P2.5 retina AAGGCTGCCT (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AAGGTCTGCC (3) 37.6 0.0376 P4.5 retina TGTAGACGGA (3) 29.7 0.0297 P4.5 retina CTGGGAGATG (6) 5.9 0.0059 P4.5 retina CTGGGAAATA (3) 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AAGGTCTGCC (3) 43.4 0.0434 P6.5 retina TGTAGACGGA (3) 35 0.035 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GAAGTCTGCC (4) 1.7 0.0017 P6.5 retina GAGGAGCCCC (3) 1.7 0.0017 P6.5 retina GAGGGAGCCC (10) 1.7 0.0017 P10.5 crx- retina AAGGTCTGCC (3) 48.3 0.0483 P10.5 crx- retina TGTAGACGGA (3) 11.1 0.0111 P10.5 crx- retina CTGGGAAATA (3) 5.6 0.0056 P10.5 crx- retina AAGTTTTGCC 1.9 0.0019 P10.5 crx- retina GAAGTCTGCC (4) 1.9 0.0019 P10.5 crx- retina GAGGAGCCCC (3) 1.9 0.0019 P10.5 crx- retina TACAGCAAGA (3) 1.9 0.0019 P10.5 crx+ retina AAGGTCTGCC (3) 150 0.15 P10.5 crx+ retina TGTAGACGGA (3) 40.4 0.0404 P10.5 crx+ retina GAGGAGCCCC (3) 3.8 0.0038 P10.5 crx+ retina AAGGTTTGCC 1.9 0.0019 P10.5 crx+ retina AGTGCCGGGG (2) 1.9 0.0019 Adult retinal AAGGTCTGCC (3) 94.4 0.0944 Adult retinal TGTAGACGGA (3) 20.4 0.0204 Adult retinal GAAGTCTGCC (4) 3.7 0.0037 Adult retinal AAAGGTCTGC 1.9 0.0019 Adult retinal AGTGCCGGGG (2) 1.9 0.0019 Adult retinal CCCGATATGC 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTCTGGCTGG (12) 1.9 0.0019 ONL AAGGTCTGCC (3) 105.3 0.1053 ONL TGTAGACGGA (3) 11.5 0.0115 ONL GAAGTCTGCC (4) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAGTTTTGCC 3.8 0.0038 ONL AAGGCTGCCT (4) 1.9 0.0019 ONL GAGGAGCCCC (3) 1.9 0.0019