Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332810	Gpx4	glutathione peroxidase 4	10	10 C1 (10 43.0 cM)	14779
Gene Ontology	cytosol | development | establishment and/or maintenance of chromatin architecture | glutathione peroxidase activity | glutathione peroxidase activity | mitochondrion | nuclear membrane | nucleus | oxidoreductase activity | peroxidase activity | response to oxidative stress | spermatogenesis
Human Homolog	GPX4[glutathione peroxidase 4 (phospholipid hydroperoxidase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTCTGCC CTGGGAAATG GAGGAGCCCC TGTAGACGGA (2) 42.4 0.0424 Cb medulloblastoma AAGGTCTGCC CCCGATATGC CTGGGAAATG GAGGAGCCCC GTCTGGCTGG (2) TGTAGACGGA (2) 104 0.104 P8 GC+1d culture AAGGCTGCCT AAGGTCTGCC GAGGGAGCCC (6) TGTAGACGGA (2) 66.2 0.0662 P8 GC+SHH+1d culture AAAGTCTGCC (2) AAGGTCTGCC AAGGTTTGCC AAGTTTTGCC CTGGGAAATA GAAGTCTGCC (3) GAGGAGCCCC TGTAGACGGA (2) 71.5 0.0715 3T3 fibroblasts AAAGGTCTGC AAAGTCTGCC (2) AAGGTCTGCC GTCATAGCTG (2) TGTAGACGGA (2) 136.7 0.1367 E15 cortex AAGGTCTGCC GTCATAGCTG (2) GTCTGGCTGG (2) TGTAGACGGA (2) 39.4 0.0394 P1 cortex AAGGTCTGCC TGTAGACGGA (2) 13.6 0.0136 Hypothalamus AAGGCTGCCT AAGGTCTGCC CTGGGAAATA CTGGGAAATG GAGGAGCCCC GTCTGGCTGG (2) TACAGCAAGA TGTAGACGGA (2) 99.5 0.0995 E12.5 retina AAGGTCTGCC CCCGATATGC GAGGGAGCCC (6) TGTAGACGGA (2) 47 0.047 E14.5 retina AAAGGTCTGC AAAGTCTGCC (2) AAGGCTGCCT AAGGTCTGCC CCCGATATGC CTGGGAAATA CTGGGAAATG CTGGGAGATG (3) GAGGAGCCCC TGTAGACGGA (2) 41.7 0.0417 E16.5 retina AAGGTCTGCC CTGGGAAATA GAGGAGCCCC TGTAGACGGA (2) 41.6 0.0416 E18.5 retina AAGGTCTGCC AAGGTTTGCC CCCGATATGC CTGGGAAATA GAGGAGCCCC TGTAGACGGA (2) 78.2 0.0782 P0.5 retina AAGGCTGCCT AAGGTCTGCC CTGGGAAATA CTGGGAAATG GAAGTCTGCC (3) GAGGGAGCCC (6) GTCATAGCTG (2) TGTAGACGGA (2) 84.5 0.0845 P2.5 retina AAGGCTGCCT AAGGTCTGCC GAGGGAGCCC (6) GTCATAGCTG (2) TGTAGACGGA (2) 45.8 0.0458 P4.5 retina AAGGTCTGCC CTGGGAAATA CTGGGAGATG (3) GTCATAGCTG (2) TGTAGACGGA (2) 79.2 0.0792 P6.5 retina AAGGTCTGCC GAAGTCTGCC (3) GAGGAGCCCC GAGGGAGCCC (6) GTCATAGCTG (2) TGTAGACGGA (2) 86.8 0.0868 P10.5 crx- retina AAGGTCTGCC AAGTTTTGCC CTGGGAAATA GAAGTCTGCC (3) GAGGAGCCCC TACAGCAAGA TGTAGACGGA (2) 72.6 0.0726 P10.5 crx+ retina AAGGTCTGCC AAGGTTTGCC AGTGCCGGGG GAGGAGCCCC TGTAGACGGA (2) 198 0.198 Adult retinal AAAGGTCTGC AAGGTCTGCC AGTGCCGGGG CCCGATATGC GAAGTCTGCC (3) GTCATAGCTG (2) GTCTGGCTGG (2) TGTAGACGGA (2) 128 0.128 ONL AAGGCTGCCT AAGGTCTGCC AAGTTTTGCC GAAGTCTGCC (3) GAGGAGCCCC GTCATAGCTG (2) TGTAGACGGA (2) 135.8 0.1358