Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33284
Lrrk1
leucine-rich repeat kinase 1
7
233328
Mm.33284
C230002E15Rik
RIKEN cDNA C230002E15 gene
7
319708
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAGCCACA
(
2
)
GGCAGCAAAC
(
3
)
TGCTCAGAAA
(
2
)
17.9
0.0179
Cb medulloblastoma
GGCAGCAAAC
(
3
)
GTTTAAAAAA
(
2
)
TGCTCAGAAA
(
2
)
18.4
0.0184
P8 GC+1d culture
GGCAGCAAAC
(
3
)
20.5
0.0205
P8 GC+SHH+1d culture
GGAAGCCACA
(
2
)
GGCAGCAAAC
(
3
)
GTTTAAAAAA
(
2
)
11.8
0.0118
3T3 fibroblasts
CTGGTGAGAC
(
2
)
3.5
0.0035
E15 cortex
GGAAGCCACA
(
2
)
GGCAGCAAAC
(
3
)
94
0.094
P1 cortex
GGCAGCAAAC
(
3
)
22.7
0.0227
Hypothalamus
GGCAGCAAAC
(
3
)
9.1
0.0091
E12.5 retina
GGCAGCAAAC
(
3
)
3.8
0.0038
E14.5 retina
GTTTAAAAAA
(
2
)
1.8
0.0018
E16.5 retina
GGCAGCAAAC
(
3
)
5.4
0.0054
E18.5 retina
CTGGTGAGAC
(
2
)
GTTTAAAAAA
(
2
)
5.4
0.0054
P0.5 retina
GGCAGCAAAC
(
3
)
7.9
0.0079
P2.5 retina
GGCAGCAAAC
(
3
)
GTTTAAAAAA
(
2
)
12.4
0.0124
P4.5 retina
GGCAGCAAAC
(
3
)
13.9
0.0139
P6.5 retina
GGCAGCAAAC
(
3
)
TGCTCAGAAA
(
2
)
26.7
0.0267
P10.5 crx- retina
GGCAGCAAAC
(
3
)
33.4
0.0334
P10.5 crx+ retina
GGCAGCAAAC
(
3
)
17.3
0.0173
Adult retinal
GGCAGCAAAC
(
3
)
18.5
0.0185
ONL
TGCTCAGAAA
(
2
)
1.9
0.0019
