Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33376
Shoc2
soc-2 (suppressor of clear) homolog (C. elegans)
19
56392
Human Homolog
SHOC2[soc-2 suppressor of clear homolog (C. elegans)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 19 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
AGTAGTAGTT
(
2
)
CTCAGCATCC
(
2
)
4.6
0.0046
P8 GC+1d culture
AGTAGTAGTT
(
2
)
CTCAGCATCC
(
2
)
GACTCTTTGA
GTCTGATAGA
4.4
0.0044
P8 GC+SHH+1d culture
CTCAGCATCC
(
2
)
GACTCTTTGA
GTCTGATAGA
3.6
0.0036
P1 cortex
AGTAGTAGTT
(
2
)
4.5
0.0045
E14.5 retina
GACTCTTTGA
3.6
0.0036
E16.5 retina
AGTAGTAGTT
(
2
)
1.8
0.0018
E18.5 retina
AGTAGTAGTT
(
2
)
1.8
0.0018
P6.5 retina
AGTAGTAGTT
(
2
)
GACTCTTTGA
3.4
0.0034
P10.5 crx- retina
AGTAGTAGTT
(
2
)
3.7
0.0037
P10.5 crx+ retina
AGTAGTAGTT
(
2
)
GACTCTTTGA
GTCTGATAGA
7.6
0.0076
