Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.334789
1110017C15Rik
RIKEN cDNA 1110017C15 gene
8
66164
Mm.334789
6330509M23Rik
RIKEN cDNA 6330509M23 gene
8
76155
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 85 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TTGCTGTGTG (
5
)
4.9
0.0049
P8 Cb GC
AGACTGGAAA (
7
)
3.3
0.0033
P8 Cb GC
AGCCTGGAAA (
4
)
3.3
0.0033
P8 Cb GC
ATAGCACAGT
(
3
)
1.6
0.0016
P8 Cb GC
TTTGAGCAGA
(
3
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
TTGCTGTGTG (
5
)
6.9
0.0069
Cb medulloblastoma
AGACTGGAAA (
7
)
2.3
0.0023
Cb medulloblastoma
AGCCTGGAAA (
4
)
2.3
0.0023
Cb medulloblastoma
ATAGCACAGT
(
3
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TTGCTGTGTG (
5
)
6.8
0.0068
P8 GC+1d culture
ATAGCACAGT
(
3
)
4.6
0.0046
P8 GC+1d culture
AGACTGGAAA (
7
)
2.3
0.0023
P8 GC+1d culture
TGCCACCAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TTGCTGTGTG (
5
)
10.5
0.0105
P8 GC+SHH+1d culture
AGCCTGGAAA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
ATAGCACAGT
(
3
)
2.3
0.0023
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
ATAGCACAGT
(
3
)
3.5
0.0035
3T3 fibroblasts
TTGCTGTGTG (
5
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
TTGCTGTGTG (
5
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TTGCTGTGTG (
5
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
AGCCTGGAAA (
4
)
3.6
0.0036
Hypothalamus
ATAGCACAGT
(
3
)
1.8
0.0018
Hypothalamus
TTGCTGTGTG (
5
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
ATAGCACAGT
(
3
)
15
0.015
E12.5 retina
TATGTATGTG (
12
)
3.8
0.0038
E12.5 retina
TTGCTGTGTG (
5
)
3.8
0.0038
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TTGCTGTGTG (
5
)
7.3
0.0073
E14.5 retina
ATAGCACAGT
(
3
)
5.5
0.0055
E14.5 retina
AGCCTGGAAA (
4
)
3.6
0.0036
E14.5 retina
TATGTATGTG (
12
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TTGCTGTGTG (
5
)
10.9
0.0109
E16.5 retina
AGACTGGAAA (
7
)
3.6
0.0036
E16.5 retina
AGCCTGGAAA (
4
)
1.8
0.0018
E16.5 retina
TATGTATGTG (
12
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
AGACTGGAAA (
7
)
3.6
0.0036
E18.5 retina
TTGCTGTGTG (
5
)
3.6
0.0036
E18.5 retina
ATAGCACAGT
(
3
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
AGACTGGAAA (
7
)
2
0.002
P0.5 retina
ATAGCACAGT
(
3
)
2
0.002
P0.5 retina
TATGTATGTG (
12
)
2
0.002
P0.5 retina
TGCCACCAAG
(
4
)
2
0.002
P0.5 retina
TTGCTGTGTG (
5
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TTGCTGTGTG (
5
)
8.8
0.0088
P2.5 retina
ATAGCACAGT
(
3
)
3.5
0.0035
P2.5 retina
AGACTGGAAA (
7
)
1.8
0.0018
P2.5 retina
TGCCACCAAG
(
4
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TTGCTGTGTG (
5
)
11.9
0.0119
P4.5 retina
AGCCTGGAAA (
4
)
2
0.002
P4.5 retina
ATAGCACAGT
(
3
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
TTGCTGTGTG (
5
)
26.7
0.0267
P6.5 retina
AGCCTGGAAA (
4
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TTGCTGTGTG (
5
)
18.6
0.0186
P10.5 crx- retina
AGCCTGGAAA (
4
)
5.6
0.0056
P10.5 crx- retina
ATAGCACAGT
(
3
)
5.6
0.0056
P10.5 crx- retina
TATGTATGTG (
12
)
3.7
0.0037
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TTGCTGTGTG (
5
)
5.8
0.0058
P10.5 crx+ retina
ATAGCACAGT
(
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TTGCTGTGTG (
5
)
18.5
0.0185
Adult retinal
AGCCTGGAAA (
4
)
5.6
0.0056
Adult retinal
ATAGCACAGT
(
3
)
5.6
0.0056
Adult retinal
TATGTATGTG (
12
)
1.9
0.0019
Adult retinal
TGCCACCAAG
(
4
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
AGCCTGGAAA (
4
)
3.8
0.0038
ONL
TTGCTGTGTG (
5
)
3.8
0.0038
ONL
TTTGAGCAGA
(
3
)
1.9
0.0019