Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335315	Eef1a1	eukaryotic translation elongation factor 1 alpha 1	9		13627
Gene Ontology	cytoplasm | GTP binding | protein biosynthesis | translation elongation factor activity | translational elongation
Human Homolog	EEF1A1[eukaryotic translation elongation factor 1 alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 320 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTTTGAG AAGGCAGACA (2) AGGCAGACAG AGGCAGACCG AGGCGGACAG AGGGCAGACA CAAGTTTGCC CAAGTTTGCT CTCTTCTGGC CTGGAGCCAA GGCTTGCCAG GGGCAGACAG (2) GGGTTGCCAG (2) GTACAACTTG GTGGTTACCT TAGAAGTCTG TCACGAACAG TCCCCTACAT TGTGTTGAGA TTTTTGATGA 262.4 0.2624 Cb medulloblastoma AAGGCAGACA (2) AGGCAGACAG AGGCAGCCAG (2) CAAGTTTGCT CTCTTCTGGC GGAATAAACT (2) GGGCAGACAG (2) TCCCCTACAT TGGTTTCTTT TGTGTTGAGA 80.8 0.0808 P8 GC+1d culture AAGCTTTGAG AAGGCAGACA (2) ACTCTTCTGG (2) AGGCAGACAG AGGCAGGCAG (2) AGGCATACAG CAAGTTTGCT CACGTAGGCA CTATGTGGGC (2) CTGGAACCCA CTGGAGGCCA (2) CTGGGAAGCA (2) GAAGCTTTTA GGAAGCAAGG GGCTTGCCAG GGGCAGACAG (2) GGGTTGCCAG (2) TCACGAACAG TCCCCTACAT TGGCAGACAG TGGTTTCTTT TGTGTTGAGA TTTTTGATGA 344.5 0.3445 P8 GC+SHH+1d culture AAGCTTTGAG AAGGCAGACA (2) ACTCTTCTGG (2) AGGCAAACAG (2) AGGCAGACAG AGGCAGACGG AGGCAGGCAG (2) ATTACAGACA (4) CAAGTTTGCT CACGTAGGCA CTATGTGGGC (2) CTGGAGCCAG (2) GGAAGCAAGG GGCTTGCCAG GGGCAGACAG (2) GGGTTGCCAG (2) TCACGAACAG TCATTGGGTT TCCCCTACAT TGGCAGACAG TGTGTTGAGA TTTTTGATGA 323.2 0.3232 3T3 fibroblasts AAGGCAGACA (2) AGGCAGACAG AGGCAGCCAG (2) CAAGTTTGCT CACGTAGGCA CTATGTGGGC (2) CTGGAGCCAA CTGGAGGCCA (2) CTGGGAAGCA (2) GAAGCTTTTA GGCTTGCCAG GGGCAGACAG (2) GTACAAGCAG TCACGAACAG TCCCCTACAT TGGCAGACAG TTTTTGATGA 858.6 0.8586 E15 cortex AAGCTTTGAG ACTCTTCTGG (2) AGGCAGACAG GGCAGACAGT (2) GGGCAGACAG (2) GGGTTGCCAG (2) TCCCCTACAT TGGCAGACAG TGTGTTGAGA TTTTTGATGA 647.9 0.6479 P1 cortex AAGCAGACAG (2) AGGCAAACAG (2) AGGCACACAG AGGCAGACAG AGGCAGACGG AGGCAGCCAG (2) AGGCGGACAG CTGGAGGCCA (2) GGCAGACAGT (2) TCCCCTACAT TGGTTTCTTT TTTTTGATGA 395.1 0.3951 Hypothalamus AAGCTTTGAG AGGCAAACAG (2) AGGCAGACAG AGGCAGACTG (2) AGGCAGCCAG (2) CAAGTTTGCT CTATGTGGGC (2) CTGGAGCCAA GGCAGACAGT (2) GGCTTGCCAG GTGGTTACCT TGTGTTGAGA TTTTTGATGA 128.4 0.1284 E12.5 retina AAGCAGACAG (2) AAGGCAGACA (2) AGGCAGACAG AGGCAGCCAG (2) CAAGTTTGCT CACGTAGGCA CTGGAACCCA CTGGAGCCAG (2) GGCTTGCCAG GGGCAGACAG (2) TCCCCTACAT TGGTTTCTTT TGTGTTGAGA TTTTTATTTG (2) TTTTTGATGA 330.6 0.3306 E14.5 retina AAGCTTTGAG AGGCAAACAG (2) AGGCAGACAG AGGCAGACTG (2) AGGCAGCCAG (2) CAAGTTTGCT CTATGTGGGC (2) CTGGAGCCAA GGCTTGCCAG GGGTTGCCAG (2) GTGGTTACCT TGGCAGACAG TGGCCCCAGC (3) TGGGGCAGGT TGTGTTGAGA TTTTTGATGA 231.3 0.2313 E16.5 retina AAGCTTTGAG AAGGCAGACA (2) AGGCAAACAG (2) AGGCAGACAG AGGCAGACTG (2) AGGCAGCCAG (2) AGGCAGGCAG (2) AGGCGGACAG CAAGTTTGCT CTATGTGGGC (2) CTCTTCTGGC CTGGAGCCAA GGCTTGCCAG TCACGAACAG TCCCCTACAT TGGCAGACAG TGTGTTGAGA TTTTTATTTG (2) TTTTTGATGA 363.8 0.3638 E18.5 retina AAGCAGACAG (2) AAGGCAGACA (2) AGGCAAACAG (2) AGGCACACAG AGGCAGACAG AGGCGGACAG CAAGTTTGCT CTATGTGGGC (2) CTCTTCTGGC GGCAGACAGT (2) GGCTTGCCAG GGGCAGACAG (2) GGGGGGGCAC GGGTTGCCAG (2) TCACGAACAG TGGCAGACAG TGGGGCAGGT TGTGTTGAGA TTTTTGATGA 185.2 0.1852 P0.5 retina AAGCAGACAG (2) AAGGCAGACA (2) ACTCTTCTGG (2) AGGCAAACAG (2) AGGCACACAG AGGCAGACAG AGGCAGACTG (2) AGGCATACAG AGGGCAGACA ATTACAGACA (4) CAAGTTTGCT CTATGTGGGC (2) CTGGAACCCA CTGGAGCCAA CTGGAGCCAG (2) CTGGGAAGCA (2) GGGCAGACAG (2) GTACAAGCAG GTGGTTACCT TCCCCTACAT TGGCAGACAG TGGTTTCTTT TTTTTGATGA 555.8 0.5558 P2.5 retina AGGCAGACAG AGGCAGCCAG (2) AGGCAGGCAG (2) CAAGTTTGCT CACGTAGGCA CTATGTGGGC (2) GAAGCTTTTA GGCTTGCCAG GGGTTGCCAG (2) GTACAACTTG GTACAAGCAG TAGAAGTCTG TCACGAACAG TCCCCTACAT TGGCAGACAG TTTTTGATGA 157 0.157 P4.5 retina AAGGCAGACA (2) AGGCAAACAG (2) AGGCAGACAG AGGCATACAG AGGCGGACAG AGGGCAGACA ATTACAGACA (4) CTCTTCTGGC GGGCAGACAG (2) TCACGAACAG TCCCCTACAT TGTGTTGAGA TTTTTGATGA 121 0.121 P6.5 retina AAGGCAGACA (2) AGGCACACAG AGGCAGACAG AGGCAGACCG AGGCAGACTG (2) AGGCAGCCAG (2) ATTACAGACA (4) CAAGTTTGCT CATCGTAAAC (2) CTGGAGCCAA CTGGAGGCCA (2) GGCAGACAGT (2) GGGGGGGCAC GGGTTGCCAG (2) TCACGAACAG TCCCCTACAT TTTTTATTTG (2) TTTTTGATGA 163.6 0.1636 P10.5 crx- retina AAGCAGACAG (2) AAGCTTTGAG AAGGCAGACA (2) AGGCAAACAG (2) AGGCAGACAG AGGCGGACAG ATTACAGACA (4) CAAGTTTGCT CATCGTAAAC (2) CTGGAACCCA CTGGAGGCCA (2) CTGGGAAGCA (2) GGCTTGCCAG GGGCAGACAG (2) GTACAACTTG TCCCCTACAT TGGCAGACAG TGGCCCCAGC (3) TGTGTTGAGA TTTTTGATGA 297.6 0.2976 P10.5 crx+ retina AAGGCAGACA (2) AGGCAGACAG AGGCAGACGG GTACAACTTG TCACGAACAG TCCCCTACAT TGTGTTGAGA TTTTTGATGA 126.7 0.1267 Adult retinal AAGCTTTGAG ACTCTTCTGG (2) AGGCACACAG AGGCAGACAG AGGCAGCCAG (2) AGGGCAGACA CACGTAGGCA CTGGAGGCCA (2) GGAAGCAAGG GGGCAGACAG (2) GGGGGGGCAC GGGTTGCCAG (2) GTGGTTACCT TCACGAACAG TCCCCTACAT 206.1 0.2061 ONL AAGCTTTGAG ACTCTTCTGG (2) AGGCAAACAG (2) AGGCAGACAG AGGCAGCCAG (2) CAAGTTTGCC GGAATAAACT (2) TCCCCTACAT TGGGGCAGGT TGGTTTCTTT TTTTTGATGA 91.7 0.0917