Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336955	Rpl10a	ribosomal protein L10A	17		19896
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | structural constituent of ribosome
Human Homolog	RPL10A[ribosomal protein L10a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAAGCCCC (6) 215.3 0.2153 P8 Cb GC AACAGCAAAA (3) 3.3 0.0033 P8 Cb GC GCAAGCCCCA (2) 3.3 0.0033 P8 Cb GC GGCAAGCCCA (3) 3.3 0.0033 P8 Cb GC TTTTCAGTGT (7) 3.3 0.0033 P8 Cb GC GCTGTGAAAT (11) 1.6 0.0016 P8 Cb GC TGGCTGCTGG (16) 1.6 0.0016 P8 Cb GC TGGGGGATAT (2) 1.6 0.0016 Cb medulloblastoma GGCAAGCCCC (6) 69.4 0.0694 Cb medulloblastoma AACAGCAAAA (3) 2.3 0.0023 Cb medulloblastoma GGAAGCCCAG (3) 2.3 0.0023 P8 GC+1d culture GGCAAGCCCC (6) 137 0.137 P8 GC+1d culture GACCCCCCTG 3.4 0.0034 P8 GC+1d culture GTGGCAAAAT (2) 3.4 0.0034 P8 GC+1d culture TTTTCAGTGT (7) 3.4 0.0034 P8 GC+1d culture GGCAAGCCCA (3) 2.3 0.0023 P8 GC+1d culture GACATCGAGG (3) 1.1 0.0011 P8 GC+1d culture GCTGTGAAAT (11) 1.1 0.0011 P8 GC+1d culture GGCAATCCCC 1.1 0.0011 P8 GC+1d culture TGGCTGCTGG (16) 1.1 0.0011 P8 GC+1d culture TGGGGGATAT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCAAGCCCC (6) 196.7 0.1967 P8 GC+SHH+1d culture GACCCCCCTG 4.7 0.0047 P8 GC+SHH+1d culture TTTTCAGTGT (7) 3.5 0.0035 P8 GC+SHH+1d culture TTTTCATTGT (6) 2.3 0.0023 P8 GC+SHH+1d culture AACAGCAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCAAAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCCAAAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTGCTGG (16) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTCATTG (3) 1.2 0.0012 3T3 fibroblasts GGCAAGCCCC (6) 389.1 0.3891 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GACATCGAGG (3) 3.5 0.0035 3T3 fibroblasts GGCAAGCCCA (3) 3.5 0.0035 3T3 fibroblasts GGGCAAGCCC (2) 3.5 0.0035 3T3 fibroblasts GTGGCCAAAG (3) 3.5 0.0035 3T3 fibroblasts TGGCTGCTGG (16) 3.5 0.0035 E15 cortex GGCAAGCCCC (6) 183.1 0.1831 E15 cortex GGCAAAGCCC (3) 9.9 0.0099 E15 cortex GTGCTCTTGA (2) 9.9 0.0099 E15 cortex GACATCGAGG (3) 4.9 0.0049 E15 cortex GGCAAGCCCA (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTGGCAAAAT (2) 4.9 0.0049 E15 cortex TGGCTGCTGG (16) 4.9 0.0049 P1 cortex GGCAAGCCCC (6) 86.4 0.0864 P1 cortex GCTGTGAAAT (11) 4.5 0.0045 P1 cortex TTTTCAGTGT (7) 4.5 0.0045 Hypothalamus GGCAAGCCCC (6) 103.2 0.1032 Hypothalamus TGGCTGCTGG (16) 3.6 0.0036 Hypothalamus TGGGGGATAT (2) 3.6 0.0036 Hypothalamus GTGCTCTTGA (2) 1.8 0.0018 Hypothalamus GTGGCAAAAT (2) 1.8 0.0018 Hypothalamus TTTTCAGTGT (7) 1.8 0.0018 Hypothalamus TTTTCATTGT (6) 1.8 0.0018 E12.5 retina GGCAAGCCCC (6) 405.5 0.4055 E12.5 retina GCAAGCCCCA (2) 3.8 0.0038 E12.5 retina GTGGCAAAAT (2) 3.8 0.0038 E12.5 retina TTTTCATTGT (6) 3.8 0.0038 E12.5 retina GACATCGAGG (3) 1.9 0.0019 E12.5 retina GGAAGCCCAG (3) 1.9 0.0019 E12.5 retina GGCAAGGCCC (8) 1.9 0.0019 E12.5 retina GGGCAAGCCC (2) 1.9 0.0019 E12.5 retina GTGCTCTTGA (2) 1.9 0.0019 E12.5 retina TGGCTGCTGG (16) 1.9 0.0019 E12.5 retina TGGGGGATAT (2) 1.9 0.0019 E12.5 retina TTTTCAGTGT (7) 1.9 0.0019 E14.5 retina GGCAAGCCCC (6) 428.2 0.4282 E14.5 retina TGGCTGCTGG (16) 23.7 0.0237 E14.5 retina TTTTTCATTG (3) 14.6 0.0146 E14.5 retina GACATCGAGG (3) 3.6 0.0036 E14.5 retina GGCAAAGCCC (3) 3.6 0.0036 E14.5 retina GTGCTCTTGA (2) 3.6 0.0036 E14.5 retina GTGGCCAAAG (3) 3.6 0.0036 E14.5 retina TTTTCATTGT (6) 3.6 0.0036 E14.5 retina AACAGCAAAA (3) 1.8 0.0018 E14.5 retina GGCAAGCCCA (3) 1.8 0.0018 E14.5 retina GGGCAAGCCC (2) 1.8 0.0018 E14.5 retina TGGGGGATAT (2) 1.8 0.0018 E16.5 retina GGCAAGCCCC (6) 594.1 0.5941 E16.5 retina TGGCTGCTGG (16) 7.2 0.0072 E16.5 retina TGGGGGATAT (2) 5.4 0.0054 E16.5 retina TTTTCATTGT (6) 5.4 0.0054 E16.5 retina GGCAAAGCCC (3) 3.6 0.0036 E16.5 retina GTGCTCTTGA (2) 3.6 0.0036 E16.5 retina GTGGCAAAAT (2) 3.6 0.0036 E16.5 retina GACATCGAGG (3) 1.8 0.0018 E16.5 retina GCTGTGAAAT (11) 1.8 0.0018 E16.5 retina GGCAATCCCC 1.8 0.0018 E16.5 retina TTTTTCATTG (3) 1.8 0.0018 E18.5 retina GGCAAGCCCC (6) 372.9 0.3729 E18.5 retina GGCAAAGCCC (3) 3.6 0.0036 E18.5 retina GGCAAGGCCC (8) 3.6 0.0036 E18.5 retina GGAAGCCCAG (3) 1.8 0.0018 E18.5 retina GTGCTCTTGA (2) 1.8 0.0018 E18.5 retina TGGCTGCTGG (16) 1.8 0.0018 P0.5 retina GGCAAGCCCC (6) 237.5 0.2375 P0.5 retina GTGGCAAAAT (2) 7.9 0.0079 P0.5 retina TTTTCAGTGT (7) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGGGGGATAT (2) 3.9 0.0039 P0.5 retina GCTGTGAAAT (11) 2 0.002 P0.5 retina GGGCAAGCCC (2) 2 0.002 P2.5 retina GGCAAGCCCC (6) 256.9 0.2569 P2.5 retina TGGCTGCTGG (16) 8.8 0.0088 P2.5 retina GCAAGCCCCA (2) 3.5 0.0035 P2.5 retina GGGCAAGCCC (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTTTCATTGT (6) 1.8 0.0018 P4.5 retina GGCAAGCCCC (6) 328.9 0.3289 P4.5 retina GGCAAGGCCC (8) 5.9 0.0059 P4.5 retina GTGCTCTTGA (2) 4 0.004 P4.5 retina GCTGTGAAAT (11) 2 0.002 P4.5 retina GGCAAGCCCA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGGCCAAAG (3) 2 0.002 P4.5 retina TGGCTGCTGG (16) 2 0.002 P4.5 retina TGGGGGATAT (2) 2 0.002 P6.5 retina GGCAAGCCCC (6) 275.1 0.2751 P6.5 retina GTGCTCTTGA (2) 6.7 0.0067 P6.5 retina GCAAGCCCCA (2) 5 0.005 P6.5 retina GTGGCAAAAT (2) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGGCTGCTGG (16) 3.3 0.0033 P6.5 retina GCTGTGAAAT (11) 1.7 0.0017 P6.5 retina GGAAGCCCAG (3) 1.7 0.0017 P6.5 retina GGCAAAGCCC (3) 1.7 0.0017 P6.5 retina GGCAAGGCCC (8) 1.7 0.0017 P6.5 retina TGGGGGATAT (2) 1.7 0.0017 P6.5 retina TTTTCAGTGT (7) 1.7 0.0017 P6.5 retina TTTTCATTGT (6) 1.7 0.0017 P10.5 crx- retina GGCAAGCCCC (6) 436.6 0.4366 P10.5 crx- retina TGGGGGATAT (2) 7.4 0.0074 P10.5 crx- retina GGCAAAGCCC (3) 5.6 0.0056 P10.5 crx- retina GTGCTCTTGA (2) 5.6 0.0056 P10.5 crx- retina GTGGCCAAAG (3) 3.7 0.0037 P10.5 crx- retina GGGCAAGCCC (2) 1.9 0.0019 P10.5 crx- retina TGGCTGCTGG (16) 1.9 0.0019 P10.5 crx- retina TTTTCATTGT (6) 1.9 0.0019 P10.5 crx+ retina GGCAAGCCCC (6) 344.1 0.3441 P10.5 crx+ retina GACATCGAGG (3) 3.8 0.0038 P10.5 crx+ retina GGCAAGGCCC (8) 3.8 0.0038 P10.5 crx+ retina GTGGCCAAAG (3) 3.8 0.0038 P10.5 crx+ retina GCTGTGAAAT (11) 1.9 0.0019 P10.5 crx+ retina GGGCAAGCCC (2) 1.9 0.0019 P10.5 crx+ retina GTGCTCTTGA (2) 1.9 0.0019 P10.5 crx+ retina GTGGCAAAAT (2) 1.9 0.0019 Adult retinal GGCAAGCCCC (6) 122.2 0.1222 Adult retinal TGGCTGCTGG (16) 5.6 0.0056 Adult retinal GTGGCAAAAT (2) 3.7 0.0037 Adult retinal TTTTCATTGT (6) 3.7 0.0037 Adult retinal GACATCGAGG (3) 1.9 0.0019 Adult retinal GGCAAGGCCC (8) 1.9 0.0019 Adult retinal GGCAATCCCC 1.9 0.0019 Adult retinal GGGCAAGCCC (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGCTCTTGA (2) 1.9 0.0019 Adult retinal TTTTTCATTG (3) 1.9 0.0019 ONL GGCAAGCCCC (6) 122.6 0.1226 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGGCTGCTGG (16) 5.7 0.0057 ONL TTTTTCATTG (3) 3.8 0.0038 ONL GGCAAGGCCC (8) 1.9 0.0019 ONL TTTTCAGTGT (7) 1.9 0.0019