Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336955	Rpl10a	ribosomal protein L10A	17		19896
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | structural constituent of ribosome
Human Homolog	RPL10A[ribosomal protein L10a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAGCAAAA (2) GCAAGCCCCA (2) GCTGTGAAAT (6) GGCAAGCCCA (3) GGCAAGCCCC TGGCTGCTGG (3) TGGGGGATAT TTTTCAGTGT (2) 233.3 0.2333 Cb medulloblastoma AACAGCAAAA (2) GGAAGCCCAG GGCAAGCCCC 74 0.074 P8 GC+1d culture GACATCGAGG (2) GACCCCCCTG GCTGTGAAAT (6) GGCAAGCCCA (3) GGCAAGCCCC GGCAATCCCC GTGGCAAAAT TGGCTGCTGG (3) TGGGGGATAT TTTTCAGTGT (2) 155 0.155 P8 GC+SHH+1d culture AACAGCAAAA (2) GACCCCCCTG GGCAAGCCCC GTGGCAAAAT GTGGCCAAAG (2) TGGCTGCTGG (3) TTTTCAGTGT (2) TTTTCATTGT (2) TTTTTCATTG 213.2 0.2132 3T3 fibroblasts GACATCGAGG (2) GGCAAGCCCA (3) GGCAAGCCCC GGGCAAGCCC (2) GTCATAGCTG (2) GTGGCCAAAG (2) TGGCTGCTGG (3) 417.1 0.4171 E15 cortex GACATCGAGG (2) GGCAAAGCCC (2) GGCAAGCCCA (3) GGCAAGCCCC GTCATAGCTG (2) GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) 227.4 0.2274 P1 cortex GCTGTGAAAT (6) GGCAAGCCCC TTTTCAGTGT (2) 95.4 0.0954 Hypothalamus GGCAAGCCCC GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) TGGGGGATAT TTTTCAGTGT (2) TTTTCATTGT (2) 117.6 0.1176 E12.5 retina GACATCGAGG (2) GCAAGCCCCA (2) GGAAGCCCAG GGCAAGCCCC GGCAAGGCCC GGGCAAGCCC (2) GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) TGGGGGATAT TTTTCAGTGT (2) TTTTCATTGT (2) 432.1 0.4321 E14.5 retina AACAGCAAAA (2) GACATCGAGG (2) GGCAAAGCCC (2) GGCAAGCCCA (3) GGCAAGCCCC GGGCAAGCCC (2) GTGCTCTTGA (2) GTGGCCAAAG (2) TGGCTGCTGG (3) TGGGGGATAT TTTTCATTGT (2) TTTTTCATTG 491.7 0.4917 E16.5 retina GACATCGAGG (2) GCTGTGAAAT (6) GGCAAAGCCC (2) GGCAAGCCCC GGCAATCCCC GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) TGGGGGATAT TTTTCATTGT (2) TTTTTCATTG 630.1 0.6301 E18.5 retina GGAAGCCCAG GGCAAAGCCC (2) GGCAAGCCCC GGCAAGGCCC GTGCTCTTGA (2) TGGCTGCTGG (3) 385.5 0.3855 P0.5 retina GCTGTGAAAT (6) GGCAAGCCCC GGGCAAGCCC (2) GTCATAGCTG (2) GTGGCAAAAT TGGGGGATAT TTTTCAGTGT (2) 263.1 0.2631 P2.5 retina GCAAGCCCCA (2) GGCAAGCCCC GGGCAAGCCC (2) GTCATAGCTG (2) TGGCTGCTGG (3) TTTTCATTGT (2) 276.3 0.2763 P4.5 retina GCTGTGAAAT (6) GGCAAGCCCA (3) GGCAAGCCCC GGCAAGGCCC GTCATAGCTG (2) GTGCTCTTGA (2) GTGGCCAAAG (2) TGGCTGCTGG (3) TGGGGGATAT 350.8 0.3508 P6.5 retina GCAAGCCCCA (2) GCTGTGAAAT (6) GGAAGCCCAG GGCAAAGCCC (2) GGCAAGCCCC GGCAAGGCCC GTCATAGCTG (2) GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) TGGGGGATAT TTTTCAGTGT (2) TTTTCATTGT (2) 310.3 0.3103 P10.5 crx- retina GGCAAAGCCC (2) GGCAAGCCCC GGGCAAGCCC (2) GTGCTCTTGA (2) GTGGCCAAAG (2) TGGCTGCTGG (3) TGGGGGATAT TTTTCATTGT (2) 464.6 0.4646 P10.5 crx+ retina GACATCGAGG (2) GCTGTGAAAT (6) GGCAAGCCCC GGCAAGGCCC GGGCAAGCCC (2) GTGCTCTTGA (2) GTGGCAAAAT GTGGCCAAAG (2) 363.1 0.3631 Adult retinal GACATCGAGG (2) GGCAAGCCCC GGCAAGGCCC GGCAATCCCC GGGCAAGCCC (2) GTCATAGCTG (2) GTGCTCTTGA (2) GTGGCAAAAT TGGCTGCTGG (3) TTTTCATTGT (2) TTTTTCATTG 148.5 0.1485 ONL GGCAAGCCCC GGCAAGGCCC GTCATAGCTG (2) TGGCTGCTGG (3) TTTTCAGTGT (2) TTTTTCATTG 141.6 0.1416