Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341331	Sdf2	stromal cell derived factor 2	11		20316
Mm.341331	Supt6h	suppressor of Ty 6 homolog (S. cerevisiae)	11	11 44.91 cM	20926
Gene Ontology	hydrolase activity, acting on ester bonds | intracellular signaling cascade | nucleic acid binding | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | nucleus | RNA binding
Human Homolog	SUPT6H[suppressor of Ty 6 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGAAAATCT (5) 3.3 0.0033 P8 Cb GC GAAGGCATCT (8) 1.6 0.0016 Cb medulloblastoma ATTATACAGT (3) 6.9 0.0069 Cb medulloblastoma GATTCTTAAT (2) 4.6 0.0046 P8 GC+1d culture GATTCTTAAT (2) 6.8 0.0068 P8 GC+1d culture ATTATACAGT (3) 1.1 0.0011 P8 GC+1d culture CAGAGCTGTG (5) 1.1 0.0011 P8 GC+1d culture TGGAAAATCT (5) 1.1 0.0011 P8 GC+SHH+1d culture GATTCTTAAT (2) 3.5 0.0035 P8 GC+SHH+1d culture ATTATACAGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGAAAATCT (5) 2.3 0.0023 3T3 fibroblasts GCTGTCGTCA (5) 3.5 0.0035 E15 cortex GCTGTCGTCA (5) 29.7 0.0297 E15 cortex TGGAAAATCT (5) 4.9 0.0049 Hypothalamus CAGAGCTGTG (5) 5.4 0.0054 Hypothalamus GATTCTTAAT (2) 1.8 0.0018 Hypothalamus GCTGTCGTCA (5) 1.8 0.0018 E12.5 retina ATTATACAGT (3) 1.9 0.0019 E12.5 retina GATTCTTAAT (2) 1.9 0.0019 E14.5 retina ATTATACAGT (3) 5.5 0.0055 E14.5 retina CAGAGCTGTG (5) 3.6 0.0036 E14.5 retina GATTCTTAAT (2) 3.6 0.0036 E16.5 retina ATTATACAGT (3) 3.6 0.0036 E16.5 retina GATTCTTAAT (2) 3.6 0.0036 E16.5 retina CTGGGTAAAA (8) 1.8 0.0018 E16.5 retina TGGAAAATCT (5) 1.8 0.0018 E18.5 retina GATTCTTAAT (2) 3.6 0.0036 E18.5 retina TGGAAAATCT (5) 3.6 0.0036 E18.5 retina ATTATACAGT (3) 1.8 0.0018 E18.5 retina CTGGGTAAAA (8) 1.8 0.0018 P0.5 retina TGGAAAATCT (5) 2 0.002 P2.5 retina GATTCTTAAT (2) 8.8 0.0088 P2.5 retina TGGAAAATCT (5) 3.5 0.0035 P4.5 retina GATTCTTAAT (2) 7.9 0.0079 P4.5 retina TGGAAAATCT (5) 5.9 0.0059 P4.5 retina ATTATACAGT (3) 2 0.002 P6.5 retina CTGGGTAAAA (8) 3.3 0.0033 P6.5 retina GATTCTTAAT (2) 3.3 0.0033 P6.5 retina ATTATACAGT (3) 1.7 0.0017 P10.5 crx- retina TGGAAAATCT (5) 3.7 0.0037 P10.5 crx- retina CAGAGCTGTG (5) 1.9 0.0019 P10.5 crx- retina GATTCTTAAT (2) 1.9 0.0019 P10.5 crx+ retina ATTATACAGT (3) 1.9 0.0019 P10.5 crx+ retina GATTCTTAAT (2) 1.9 0.0019 P10.5 crx+ retina TGGAAAATCT (5) 1.9 0.0019 Adult retinal ATTATACAGT (3) 3.7 0.0037 Adult retinal GAAGGCATCT (8) 1.9 0.0019 ONL ATTATACAGT (3) 1.9 0.0019 ONL GAAGGCATCT (8) 1.9 0.0019 ONL TGGAAAATCT (5) 1.9 0.0019