Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341331	Sdf2	stromal cell derived factor 2	11		20316
Mm.341331	Supt6h	suppressor of Ty 6 homolog (S. cerevisiae)	11	11 44.91 cM	20926
Gene Ontology	hydrolase activity, acting on ester bonds | intracellular signaling cascade | nucleic acid binding | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | nucleus | RNA binding
Human Homolog	SUPT6H[suppressor of Ty 6 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGGCATCT (3) TGGAAAATCT (2) 4.9 0.0049 Cb medulloblastoma ATTATACAGT (3) GATTCTTAAT (2) 11.5 0.0115 P8 GC+1d culture ATTATACAGT (3) CAGAGCTGTG (3) GATTCTTAAT (2) TGGAAAATCT (2) 10.1 0.0101 P8 GC+SHH+1d culture ATTATACAGT (3) GATTCTTAAT (2) TGGAAAATCT (2) 8.1 0.0081 3T3 fibroblasts GCTGTCGTCA (2) 3.5 0.0035 E15 cortex GCTGTCGTCA (2) TGGAAAATCT (2) 34.6 0.0346 Hypothalamus CAGAGCTGTG (3) GATTCTTAAT (2) GCTGTCGTCA (2) 9 0.009 E12.5 retina ATTATACAGT (3) GATTCTTAAT (2) 3.8 0.0038 E14.5 retina ATTATACAGT (3) CAGAGCTGTG (3) GATTCTTAAT (2) 12.7 0.0127 E16.5 retina ATTATACAGT (3) CTGGGTAAAA GATTCTTAAT (2) TGGAAAATCT (2) 10.8 0.0108 E18.5 retina ATTATACAGT (3) CTGGGTAAAA GATTCTTAAT (2) TGGAAAATCT (2) 10.8 0.0108 P0.5 retina TGGAAAATCT (2) 2 0.002 P2.5 retina GATTCTTAAT (2) TGGAAAATCT (2) 12.3 0.0123 P4.5 retina ATTATACAGT (3) GATTCTTAAT (2) TGGAAAATCT (2) 15.8 0.0158 P6.5 retina ATTATACAGT (3) CTGGGTAAAA GATTCTTAAT (2) 8.3 0.0083 P10.5 crx- retina CAGAGCTGTG (3) GATTCTTAAT (2) TGGAAAATCT (2) 7.5 0.0075 P10.5 crx+ retina ATTATACAGT (3) GATTCTTAAT (2) TGGAAAATCT (2) 5.7 0.0057 Adult retinal ATTATACAGT (3) GAAGGCATCT (3) 5.6 0.0056 ONL ATTATACAGT (3) GAAGGCATCT (3) TGGAAAATCT (2) 5.7 0.0057