Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3451	Fmr1	fragile X mental retardation syndrome 1 homolog	X	X 24.5 cM	14265
Gene Ontology	central nervous system development | mRNA processing | mRNA-nucleus export | nucleic acid binding | nucleus | RNA binding | transport
Human Homolog	FMR1[fragile X mental retardation 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAAGATCA (4) 31 0.031 P8 Cb GC AGGCTCATTT (3) 8.2 0.0082 P8 Cb GC TTTTTAAAAT (7) 3.3 0.0033 P8 Cb GC AAATGCTGTG (5) 1.6 0.0016 P8 Cb GC ATTGACCTGC (2) 1.6 0.0016 P8 Cb GC TCCTGTGTCA (7) 1.6 0.0016 Cb medulloblastoma AGGCTCATTT (3) 2.3 0.0023 Cb medulloblastoma TGCAGTTTGT (2) 2.3 0.0023 P8 GC+1d culture TCCTGTGTCA (7) 16 0.016 P8 GC+1d culture AGGAAGATCA (4) 10.3 0.0103 P8 GC+1d culture AGGCTCATTT (3) 4.6 0.0046 P8 GC+1d culture AAATGCTGTG (5) 2.3 0.0023 P8 GC+1d culture TTTTTAAAAT (7) 1.1 0.0011 P8 GC+SHH+1d culture AGGAAGATCA (4) 22.2 0.0222 P8 GC+SHH+1d culture TCCTGTGTCA (7) 11.7 0.0117 P8 GC+SHH+1d culture AGGCTCATTT (3) 8.2 0.0082 P8 GC+SHH+1d culture AAATGCTGTG (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTAAAAT (7) 3.5 0.0035 P8 GC+SHH+1d culture ACTTTAAACT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGTTTGT (2) 1.2 0.0012 3T3 fibroblasts AGGCTCATTT (3) 17.5 0.0175 3T3 fibroblasts AGGAAGATCA (4) 7 0.007 E15 cortex TCCTGTGTCA (7) 44.5 0.0445 E15 cortex AGGAAGATCA (4) 9.9 0.0099 P1 cortex TCCTGTGTCA (7) 27.3 0.0273 P1 cortex TGCAGTTTGT (2) 4.5 0.0045 Hypothalamus AGGCTCATTT (3) 14.5 0.0145 Hypothalamus TGCAGTTTGT (2) 1.8 0.0018 E12.5 retina AGGCTCATTT (3) 16.9 0.0169 E12.5 retina AGGAAGATCA (4) 11.3 0.0113 E12.5 retina TGCAGTTTGT (2) 5.6 0.0056 E12.5 retina TTTTTAAAAT (7) 3.8 0.0038 E12.5 retina TCCTGTGTCA (7) 1.9 0.0019 E12.5 retina TGTGTTCCAT (2) 1.9 0.0019 E14.5 retina AGGAAGATCA (4) 9.1 0.0091 E14.5 retina AGGCTCATTT (3) 9.1 0.0091 E14.5 retina TCCTGTGTCA (7) 7.3 0.0073 E16.5 retina AGGCTCATTT (3) 30.8 0.0308 E16.5 retina AGGAAGATCA (4) 14.5 0.0145 E16.5 retina TCCTGTGTCA (7) 10.9 0.0109 E16.5 retina TGCAGTTTGT (2) 5.4 0.0054 E16.5 retina TTTTTAAAAT (7) 5.4 0.0054 E16.5 retina ATTGACCTGC (2) 1.8 0.0018 E16.5 retina TGTGTTCCAT (2) 1.8 0.0018 E18.5 retina AGGCTCATTT (3) 16.4 0.0164 E18.5 retina AGGAAGATCA (4) 9.1 0.0091 E18.5 retina TCCTGTGTCA (7) 1.8 0.0018 E18.5 retina TTTTTAAAAT (7) 1.8 0.0018 P0.5 retina AGGAAGATCA (4) 23.6 0.0236 P0.5 retina AGGCTCATTT (3) 13.7 0.0137 P0.5 retina TCCTGTGTCA (7) 9.8 0.0098 P0.5 retina TGCAGTTTGT (2) 7.9 0.0079 P0.5 retina TTTTTAAAAT (7) 3.9 0.0039 P2.5 retina AGGAAGATCA (4) 12.3 0.0123 P2.5 retina AGGCTCATTT (3) 12.3 0.0123 P2.5 retina TCCTGTGTCA (7) 3.5 0.0035 P2.5 retina TGCAGTTTGT (2) 3.5 0.0035 P2.5 retina AAATGCTGTG (5) 1.8 0.0018 P2.5 retina ACTTTAAACT (3) 1.8 0.0018 P2.5 retina TGTGTTCCAT (2) 1.8 0.0018 P2.5 retina TTTTTAAAAT (7) 1.8 0.0018 P4.5 retina AGGAAGATCA (4) 9.9 0.0099 P4.5 retina TTTTTAAAAT (7) 7.9 0.0079 P4.5 retina AGGCTCATTT (3) 5.9 0.0059 P4.5 retina AAATGCTGTG (5) 2 0.002 P4.5 retina ACTTTAAACT (3) 2 0.002 P4.5 retina ATTGACCTGC (2) 2 0.002 P4.5 retina TGCAGTTTGT (2) 2 0.002 P4.5 retina TGTGTTCCAT (2) 2 0.002 P6.5 retina AGGCTCATTT (3) 5 0.005 P6.5 retina TCCTGTGTCA (7) 5 0.005 P6.5 retina TTTTTAAAAT (7) 5 0.005 P10.5 crx- retina AGGCTCATTT (3) 7.4 0.0074 P10.5 crx- retina TCCTGTGTCA (7) 3.7 0.0037 P10.5 crx- retina AAATGCTGTG (5) 1.9 0.0019 P10.5 crx- retina TTTTTAAAAT (7) 1.9 0.0019 P10.5 crx+ retina TGCAGTTTGT (2) 5.8 0.0058 P10.5 crx+ retina AGGCTCATTT (3) 3.8 0.0038 P10.5 crx+ retina TTTTTAAAAT (7) 3.8 0.0038 Adult retinal TCCTGTGTCA (7) 5.6 0.0056 Adult retinal ACTTTAAACT (3) 1.9 0.0019 Adult retinal AGGCTCATTT (3) 1.9 0.0019 Adult retinal TGCAGTTTGT (2) 1.9 0.0019 ONL TTTTTAAAAT (7) 5.7 0.0057