Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3451	Fmr1	fragile X mental retardation syndrome 1 homolog	X	X 24.5 cM	14265
Gene Ontology	central nervous system development | mRNA processing | mRNA-nucleus export | nucleic acid binding | nucleus | RNA binding | transport
Human Homolog	FMR1[fragile X mental retardation 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATGCTGTG (2) AGGAAGATCA AGGCTCATTT ATTGACCTGC (2) TCCTGTGTCA (2) TTTTTAAAAT 47.3 0.0473 Cb medulloblastoma AGGCTCATTT TGCAGTTTGT 4.6 0.0046 P8 GC+1d culture AAATGCTGTG (2) AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TTTTTAAAAT 34.3 0.0343 P8 GC+SHH+1d culture AAATGCTGTG (2) ACTTTAAACT (3) AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TGCAGTTTGT TTTTTAAAAT 51.5 0.0515 3T3 fibroblasts AGGAAGATCA AGGCTCATTT 24.5 0.0245 E15 cortex AGGAAGATCA TCCTGTGTCA (2) 54.4 0.0544 P1 cortex TCCTGTGTCA (2) TGCAGTTTGT 31.8 0.0318 Hypothalamus AGGCTCATTT TGCAGTTTGT 16.3 0.0163 E12.5 retina AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TGCAGTTTGT TGTGTTCCAT TTTTTAAAAT 41.4 0.0414 E14.5 retina AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) 25.5 0.0255 E16.5 retina AGGAAGATCA AGGCTCATTT ATTGACCTGC (2) TCCTGTGTCA (2) TGCAGTTTGT TGTGTTCCAT TTTTTAAAAT 70.6 0.0706 E18.5 retina AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TTTTTAAAAT 29.1 0.0291 P0.5 retina AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TGCAGTTTGT TTTTTAAAAT 58.9 0.0589 P2.5 retina AAATGCTGTG (2) ACTTTAAACT (3) AGGAAGATCA AGGCTCATTT TCCTGTGTCA (2) TGCAGTTTGT TGTGTTCCAT TTTTTAAAAT 38.8 0.0388 P4.5 retina AAATGCTGTG (2) ACTTTAAACT (3) AGGAAGATCA AGGCTCATTT ATTGACCTGC (2) TGCAGTTTGT TGTGTTCCAT TTTTTAAAAT 33.7 0.0337 P6.5 retina AGGCTCATTT TCCTGTGTCA (2) TTTTTAAAAT 15 0.015 P10.5 crx- retina AAATGCTGTG (2) AGGCTCATTT TCCTGTGTCA (2) TTTTTAAAAT 14.9 0.0149 P10.5 crx+ retina AGGCTCATTT TGCAGTTTGT TTTTTAAAAT 13.4 0.0134 Adult retinal ACTTTAAACT (3) AGGCTCATTT TCCTGTGTCA (2) TGCAGTTTGT 11.3 0.0113 ONL TTTTTAAAAT 5.7 0.0057