Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.345443	Rps13	ribosomal protein S13	7		68052
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | structural constituent of ribosome
Human Homolog	RPS13[ribosomal protein S13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCGGAGG CACGCTCCCG GTGGCGCACG TAGAAAAAAA (3) TGTGTGTGCT (5) 26.2 0.0262 Cb medulloblastoma CACGCTCCCG GGGTGGCCCA GGTGGGGGGC (2) GTGGCGCACG TAGAAAAAAA (3) 32.3 0.0323 P8 GC+1d culture AGGGACTCAC (2) ATGGCGGAGG CACGCTCCCG GTGGCGCACG GTTGAATGAA TAGAAAAAAA (3) 30.7 0.0307 P8 GC+SHH+1d culture AGGGACTCAC (2) ATGGCGGAGG CACGCTCCCG GGTGGGGGGC (2) GTGGCGCACG GTGGTGATGA TAGAAAAAAA (3) 25.7 0.0257 3T3 fibroblasts CACGCTCCCG GTGGCGCACG GTGGTGATGA 168.2 0.1682 E15 cortex CACGCTCCCG GTGGCGCACG 168.2 0.1682 P1 cortex CACGCTCCCG GTGGCGCACG GTGGTGATGA 45.4 0.0454 Hypothalamus CACGCTCCCG GTGGCGCACG TAGAAAAAAA (3) TGTTTGGGAG 14.4 0.0144 E12.5 retina ATGGCGGAGG CACGCTCCCG GTGGCGCACG 35.7 0.0357 E14.5 retina ATGGCGGAGG CACGCTCCCG GTGGCGCACG TAGAAAAAAA (3) 36.4 0.0364 E16.5 retina AGGGACTCAC (2) ATGGCGGAGG CACGCTCCCG GTGGCGCACG TGTGTGTGCT (5) 34.4 0.0344 E18.5 retina ATGGCGGAGG CACGCTCCCG GTGGCGCACG GTTGAATGAA 23.6 0.0236 P0.5 retina ATGGCGGAGG CACGCTCCCG GTGGCGCACG TAGAAAAAAA (3) 64.8 0.0648 P2.5 retina AGGGACTCAC (2) ATGGCGGAGG CACGCTCCCG CTTAAACTTA GTGGCGCACG 29.9 0.0299 P4.5 retina ATGGCGGAGG CACGCTCCCA (2) CACGCTCCCG GGTGGGGGGC (2) GTGGCGCACG GTGGTGATGA 29.8 0.0298 P6.5 retina ATGGCGGAGG CACGCTCCCG GTGGCGCACG TGTGTGTGCT (5) 50 0.05 P10.5 crx- retina ATGGCGGAGG CTTAAACTTA GGGTGGCCCA GTGGCGCACG TAGAAAAAAA (3) 68.9 0.0689 P10.5 crx+ retina AGGGACTCAC (2) ATGGCGGAGG GGGTGGCCCA GTGGCGCACG 94.2 0.0942 Adult retinal CACGCTCCCA (2) CACGCTCCCG GTGGCGCACG GTTGAATGAA 40.8 0.0408 ONL ATGGCGGAGG CACGCTCCCG GGGTGGCCCA GTGGCGCACG TAGAAAAAAA (3) TGTGTGTGCT (5) TGTTTGGGAG 49.7 0.0497