| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 158.2 | 0.1582 |
| Cb medulloblastoma | GGGGAAATCG GTTAAAAAAA (2)
| 27.7 | 0.0277 |
| P8 GC+1d culture | GGGGAAATCC GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 334.4 | 0.3344 |
| P8 GC+SHH+1d culture | GGGGAAATCG GTTAAAAAAA (2)
| 185 | 0.185 |
| 3T3 fibroblasts | GGGGAAATCG
| 255.9 | 0.2559 |
| E15 cortex | GGGGAAATCC GGGGAAATCG GGGGGAAATC
| 569 | 0.569 |
| P1 cortex | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 295.4 | 0.2954 |
| Hypothalamus | GGGGAAATCG GTTAAAAAAA (2)
| 47.1 | 0.0471 |
| E12.5 retina | GGGGAAATCC GGGGAAATCG GTTAAAAAAA (2)
| 50.8 | 0.0508 |
| E14.5 retina | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 56.4 | 0.0564 |
| E16.5 retina | GGGGAAATCG GTTAAAAAAA (2)
| 86.9 | 0.0869 |
| E18.5 retina | GGGGAAATCG GTTAAAAAAA (2)
| 98.2 | 0.0982 |
| P0.5 retina | GGGGAAATCC GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 155 | 0.155 |
| P2.5 retina | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 82.7 | 0.0827 |
| P4.5 retina | GGGGAAATCG GTTAAAAAAA (2)
| 53.5 | 0.0535 |
| P6.5 retina | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 70.1 | 0.0701 |
| P10.5 crx- retina | GGGGAAATCG GTTAAAAAAA (2)
| 53.9 | 0.0539 |
| P10.5 crx+ retina | GGGGAAATCG GGGGGAAATC GTTAAAAAAA (2)
| 78.8 | 0.0788 |
| Adult retinal | GGGGAAATCG GGGGGAAATC
| 37.1 | 0.0371 |
| ONL | GGGGAAATCG GTTAAAAAAA (2)
| 23 | 0.023 |