Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3532	Tmsb10	thymosin, beta 10	7	2 18.0 cM	19240
Gene Ontology	actin cytoskeleton organization and biogenesis | actin monomer binding | cytoplasm
Human Homolog	TMSB10[thymosin, beta 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 198 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GGGGAAATCG 146.8 0.1468 P8 Cb GC CCCTTCTTCT (13) 63.6 0.0636 P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GGGGGAAATC (4) 6.5 0.0065 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC TAAAAAGTCA (3) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma CCCTTCTTCT (13) 80.9 0.0809 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma GAAAAGAAAA (12) 2.3 0.0023 Cb medulloblastoma GGGGAAATCG 2.3 0.0023 Cb medulloblastoma TGCAAACAGA (15) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture GGGGAAATCG 318.5 0.3185 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CCCTTCTTCT (13) 12.6 0.0126 P8 GC+1d culture ACCCGAGAGG (14) 1.1 0.0011 P8 GC+1d culture GGGGAAATCC 1.1 0.0011 P8 GC+1d culture GGGGGAAATC (4) 1.1 0.0011 P8 GC+1d culture GTGAACACTG (6) 1.1 0.0011 P8 GC+1d culture TAAAAAGTCA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GGGGAAATCG 168.6 0.1686 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture CCCTTCTTCT (13) 12.9 0.0129 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAAAAGAAAA (12) 4.7 0.0047 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture TAAAAAGTCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAACAGA (15) 1.2 0.0012 P8 GC+SHH+1d culture TGGACAGAGG (3) 1.2 0.0012 3T3 fibroblasts GGGGAAATCG 255.9 0.2559 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 E15 cortex GGGGAAATCG 544.3 0.5443 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCCTTCTTCT (13) 158.3 0.1583 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex GGGGGAAATC (4) 19.8 0.0198 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex GGGGAAATCC 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GGGGAAATCG 272.7 0.2727 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex GGGGGAAATC (4) 18.2 0.0182 P1 cortex CCCTTCTTCT (13) 4.5 0.0045 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GGGGAAATCG 38 0.038 Hypothalamus CCCTTCTTCT (13) 21.7 0.0217 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus ACCCGAGAGG (14) 3.6 0.0036 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCCTTCTTCT (13) 50.7 0.0507 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GGGGAAATCG 45.1 0.0451 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina ACCCGAGAGG (14) 3.8 0.0038 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina GGGGAAATCC 1.9 0.0019 E12.5 retina GTGAACACTG (6) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina CCCTTCTTCT (13) 43.7 0.0437 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GGGGAAATCG 34.6 0.0346 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina TGCAAACAGA (15) 3.6 0.0036 E14.5 retina ACCCGAGAGG (14) 1.8 0.0018 E14.5 retina GGGGGAAATC (4) 1.8 0.0018 E14.5 retina TAAAAAGTCA (3) 1.8 0.0018 E16.5 retina GGGGAAATCG 70.6 0.0706 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CCCTTCTTCT (13) 18.1 0.0181 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina ACCCGAGAGG (14) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina TAAAAAGTCA (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina GGGGAAATCG 70.9 0.0709 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina CCCTTCTTCT (13) 5.5 0.0055 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina GGGATATTTA (4) 1.8 0.0018 E18.5 retina TAAAAAGTCA (3) 1.8 0.0018 P0.5 retina GGGGAAATCG 145.2 0.1452 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina CCCTTCTTCT (13) 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina ACCCGAGAGG (14) 3.9 0.0039 P0.5 retina GGGGAAATCC 3.9 0.0039 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina GGGATATTTA (4) 2 0.002 P0.5 retina GGGGGAAATC (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GGGGAAATCG 73.9 0.0739 P2.5 retina CCCTTCTTCT (13) 15.8 0.0158 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina ATGAAAATGG (8) 1.8 0.0018 P2.5 retina GAAAAGAAAA (12) 1.8 0.0018 P2.5 retina GGGGGAAATC (4) 1.8 0.0018 P2.5 retina GTGAACACTG (6) 1.8 0.0018 P2.5 retina TAAAAAGTCA (3) 1.8 0.0018 P2.5 retina TGGACAGAGG (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GGGGAAATCG 41.6 0.0416 P4.5 retina CCCTTCTTCT (13) 11.9 0.0119 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina GAAAAGAAAA (12) 2 0.002 P4.5 retina TAAAAAGTCA (3) 2 0.002 P4.5 retina TGGACAGAGG (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina GGGGAAATCG 53.4 0.0534 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CCCTTCTTCT (13) 3.3 0.0033 P6.5 retina GGGGGAAATC (4) 1.7 0.0017 P6.5 retina TGCAAACAGA (15) 1.7 0.0017 P10.5 crx- retina GGGGAAATCG 48.3 0.0483 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina GAATAAAGGG (5) 3.7 0.0037 P10.5 crx- retina TGCAAACAGA (15) 3.7 0.0037 P10.5 crx- retina ATGAAAATGG (8) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGGGAAATCG 61.5 0.0615 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CCCTTCTTCT (13) 19.2 0.0192 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina GAATAAAGGG (5) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina GGGGGAAATC (4) 1.9 0.0019 P10.5 crx+ retina TAAAAAGTCA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GGGGAAATCG 35.2 0.0352 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ATGAACACTG (30) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CCCTTCTTCT (13) 5.6 0.0056 Adult retinal GAGAGCAGAA (8) 5.6 0.0056 Adult retinal GGGATATTTA (4) 3.7 0.0037 Adult retinal ATGAAAATGG (8) 1.9 0.0019 Adult retinal GGGGGAAATC (4) 1.9 0.0019 Adult retinal TGGACAGAGG (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL GGGGAAATCG 19.2 0.0192 ONL ATGAACACTG (30) 13.4 0.0134 ONL ACCCGAGAGG (14) 5.7 0.0057 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TAAAAAGTCA (3) 1.9 0.0019 ONL TGGACAGAGG (3) 1.9 0.0019