Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38474	Hmg20b	high mobility group 20 B	10	10 43.0 cM	15353
Gene Ontology	ATP binding | DNA binding | DNA binding | DNA packaging | nucleus | regulation of transcription, DNA-dependent | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	HMG20B[high-mobility group 20B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCCTCACA (3) 3.3 0.0033 P8 Cb GC GGCCCAAGGC (8) 1.6 0.0016 Cb medulloblastoma GGCCCAAGGC (8) 9.2 0.0092 Cb medulloblastoma GGAGGCAAAG (2) 2.3 0.0023 P8 GC+1d culture CTGCCTCACA (3) 5.7 0.0057 P8 GC+1d culture GGCCCAAGGC (8) 3.4 0.0034 P8 GC+1d culture GAGCCATCGA 2.3 0.0023 P8 GC+1d culture CAGGAGGAGG (10) 1.1 0.0011 P8 GC+SHH+1d culture GGCCCAAGGC (8) 7 0.007 P8 GC+SHH+1d culture CTGCCTCACA (3) 5.9 0.0059 P8 GC+SHH+1d culture GAGCCATCGA 5.9 0.0059 3T3 fibroblasts GAGCCATCGA 35 0.035 3T3 fibroblasts GGCCCAAGGC (8) 17.5 0.0175 3T3 fibroblasts CTGCCTCACA (3) 7 0.007 E15 cortex CTGCCTCACA (3) 4.9 0.0049 P1 cortex CTGCCTCACA (3) 9.1 0.0091 P1 cortex GGCCCAAGGC (8) 9.1 0.0091 P1 cortex GGAGGCAAAG (2) 4.5 0.0045 Hypothalamus GGCCCAAGGC (8) 12.7 0.0127 E12.5 retina GAGCCATCGA 11.3 0.0113 E12.5 retina CTGCCTCACA (3) 3.8 0.0038 E12.5 retina CAGGAGGAGG (10) 1.9 0.0019 E12.5 retina GGCCCAAGGC (8) 1.9 0.0019 E14.5 retina GAGCCATCGA 1.8 0.0018 E16.5 retina GGCCCAAGGC (8) 3.6 0.0036 E18.5 retina CTGCCTCACA (3) 1.8 0.0018 E18.5 retina GAGCCATCGA 1.8 0.0018 E18.5 retina GGCCCAAGGC (8) 1.8 0.0018 P0.5 retina CTGCCTCACA (3) 3.9 0.0039 P0.5 retina GAGCCATCGA 3.9 0.0039 P0.5 retina GGCCCAAGGC (8) 2 0.002 P2.5 retina GAGCCATCGA 3.5 0.0035 P2.5 retina GGCCCAAGGC (8) 1.8 0.0018 P4.5 retina CTGCCTCACA (3) 4 0.004 P4.5 retina GGCCCAAGGC (8) 4 0.004 P6.5 retina GGCCCAAGGC (8) 8.3 0.0083 P6.5 retina GAGCCATCGA 5 0.005 P6.5 retina CAGGAGGAGG (10) 1.7 0.0017 P6.5 retina CTGCCTCACA (3) 1.7 0.0017 P6.5 retina GGAGGCAAAG (2) 1.7 0.0017 P10.5 crx- retina GGCCCAAGGC (8) 16.7 0.0167 P10.5 crx- retina CTGCCTCACA (3) 5.6 0.0056 P10.5 crx- retina GAGCCATCGA 1.9 0.0019 P10.5 crx+ retina GGCCCAAGGC (8) 9.6 0.0096 P10.5 crx+ retina CTGCCTCACA (3) 5.8 0.0058 P10.5 crx+ retina CAGGAGGAGG (10) 1.9 0.0019 P10.5 crx+ retina GGAGGCAAAG (2) 1.9 0.0019 Adult retinal GGCCCAAGGC (8) 9.3 0.0093 Adult retinal GAGCCATCGA 7.4 0.0074 Adult retinal CAGGAGGAGG (10) 1.9 0.0019 Adult retinal CTGCCTCACA (3) 1.9 0.0019 ONL GGCCCAAGGC (8) 3.8 0.0038 ONL CTGCCTCACA (3) 1.9 0.0019 ONL GAGCCATCGA 1.9 0.0019