Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38474	Hmg20b	high mobility group 20 B	10	10 43.0 cM	15353
Gene Ontology	ATP binding | DNA binding | DNA binding | DNA packaging | nucleus | regulation of transcription, DNA-dependent | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	HMG20B[high-mobility group 20B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCCTCACA GGCCCAAGGC (2) 4.9 0.0049 Cb medulloblastoma GGAGGCAAAG GGCCCAAGGC (2) 11.5 0.0115 P8 GC+1d culture CAGGAGGAGG (2) CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 12.5 0.0125 P8 GC+SHH+1d culture CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 18.8 0.0188 3T3 fibroblasts CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 59.5 0.0595 E15 cortex CTGCCTCACA 4.9 0.0049 P1 cortex CTGCCTCACA GGAGGCAAAG GGCCCAAGGC (2) 22.7 0.0227 Hypothalamus GGCCCAAGGC (2) 12.7 0.0127 E12.5 retina CAGGAGGAGG (2) CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 18.9 0.0189 E14.5 retina GAGCCATCGA 1.8 0.0018 E16.5 retina GGCCCAAGGC (2) 3.6 0.0036 E18.5 retina CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 5.4 0.0054 P0.5 retina CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 9.8 0.0098 P2.5 retina GAGCCATCGA GGCCCAAGGC (2) 5.3 0.0053 P4.5 retina CTGCCTCACA GGCCCAAGGC (2) 8 0.008 P6.5 retina CAGGAGGAGG (2) CTGCCTCACA GAGCCATCGA GGAGGCAAAG GGCCCAAGGC (2) 18.4 0.0184 P10.5 crx- retina CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 24.2 0.0242 P10.5 crx+ retina CAGGAGGAGG (2) CTGCCTCACA GGAGGCAAAG GGCCCAAGGC (2) 19.2 0.0192 Adult retinal CAGGAGGAGG (2) CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 20.5 0.0205 ONL CTGCCTCACA GAGCCATCGA GGCCCAAGGC (2) 7.6 0.0076