Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40909	Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	18		20358
Gene Ontology	development | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA6A[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAGCTCTG (2) 6.5 0.0065 Cb medulloblastoma AGGCAGTGAG (2) 2.3 0.0023 Cb medulloblastoma TAAATTTGTG 2.3 0.0023 P8 GC+1d culture AACAGCTCTG (2) 16 0.016 P8 GC+1d culture AACCTGAGCG 6.8 0.0068 P8 GC+1d culture TAAATTTGTG 4.6 0.0046 P8 GC+1d culture ATAGAGTAAA 3.4 0.0034 P8 GC+1d culture AGGCAGTGAG (2) 1.1 0.0011 P8 GC+1d culture GACCTCCAGT 1.1 0.0011 P8 GC+SHH+1d culture AACAGCTCTG (2) 8.2 0.0082 P8 GC+SHH+1d culture TAAATTTGTG 3.5 0.0035 P8 GC+SHH+1d culture AACCTGAGCG 1.2 0.0012 P8 GC+SHH+1d culture AGGCAGTGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture ATAGAGTAAA 1.2 0.0012 P8 GC+SHH+1d culture GACCTCCAGT 1.2 0.0012 E15 cortex AACCTGAGCG 4.9 0.0049 P1 cortex AACAGCTCTG (2) 4.5 0.0045 E12.5 retina AACAGCTCTG (2) 1.9 0.0019 E12.5 retina ATAGAGTAAA 1.9 0.0019 E14.5 retina AACAGCTCTG (2) 5.5 0.0055 E14.5 retina TAAATTTGTG 1.8 0.0018 P0.5 retina AACAGCTCTG (2) 3.9 0.0039 P0.5 retina AACCTGAGCG 3.9 0.0039 P2.5 retina AACAGCTCTG (2) 1.8 0.0018 P2.5 retina GACCTCCAGT 1.8 0.0018 P2.5 retina TAAATTTGTG 1.8 0.0018 P6.5 retina AGGCAGTGAG (2) 1.7 0.0017 P10.5 crx- retina AACCTGAGCG 1.9 0.0019 P10.5 crx+ retina AACAGCTCTG (2) 1.9 0.0019 P10.5 crx+ retina AGGCAGTGAG (2) 1.9 0.0019 Adult retinal AACAGCTCTG (2) 3.7 0.0037 Adult retinal TAAATTTGTG 1.9 0.0019 ONL AACCTGAGCG 3.8 0.0038