| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAATTTTCCC (2) TATCCCTGGG (3)
| 4.9 | 0.0049 |
| Cb medulloblastoma | GAGCGTCTTG TAATTTTCCC (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GAGCGTCTTG GCACCCATAA TAATTTTCCC (2)
| 9 | 0.009 |
| P8 GC+SHH+1d culture | CTGTGGAACT GAGCGTCTTG GCACCCATAA TAATTTTCCC (2)
| 4.8 | 0.0048 |
| 3T3 fibroblasts | GCACCCATAA
| 3.5 | 0.0035 |
| E15 cortex | GCACCCATAA
| 4.9 | 0.0049 |
| P1 cortex | GAGCGTCTTG GCACCCATAA TAATTTTCCC (2)
| 18.1 | 0.0181 |
| Hypothalamus | GCACCCATAA TAATTTTCCC (2) TATCCCTGGG (3)
| 7.2 | 0.0072 |
| E12.5 retina | AAGTTGTTTT CTGTGGAACT GCACCCATAA
| 5.7 | 0.0057 |
| E16.5 retina | AAGTTGTTTT TAATTTTCCC (2)
| 3.6 | 0.0036 |
| E18.5 retina | GCACCCATAA TAATTTTCCC (2)
| 5.4 | 0.0054 |
| P0.5 retina | GAGCGTCTTG GCACCCATAA TAATTTTCCC (2) TATCCCTGGG (3)
| 9.9 | 0.0099 |
| P2.5 retina | AAGTTGTTTT GAGCGTCTTG TAATTTTCCC (2)
| 5.4 | 0.0054 |
| P4.5 retina | GCACCCATAA TAATTTTCCC (2)
| 9.9 | 0.0099 |
| P6.5 retina | CTGTGGAACT
| 1.7 | 0.0017 |
| P10.5 crx- retina | AAGTTGTTTT CTGTGGAACT GCACCCATAA
| 5.7 | 0.0057 |
| P10.5 crx+ retina | TAATTTTCCC (2)
| 1.9 | 0.0019 |
| ONL | GCACCCATAA TAATTTTCCC (2)
| 5.7 | 0.0057 |