Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.41746 Rpo2tc1RNA polymerase II transcriptional coactivator 15    20024 
 Gene Ontology DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription | transcription coactivator activity
 Human Homolog PC4[activated RNA polymerase II transcription cofactor 4]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGAACAATGGA (3)11.40.0114
P8 Cb GCTTCCAGATTG (5)6.50.0065
P8 Cb GCCATCTAGTGA4.90.0049
P8 Cb GCTTTTTTTTTT (433)4.90.0049
P8 Cb GCTAACTCTTTA (2)1.60.0016
P8 Cb GCTTGTCATCTC (2)1.60.0016
Cb medulloblastomaCATCTAGTGA2.30.0023
Cb medulloblastomaGGCTTTGGTT (3)2.30.0023
Cb medulloblastomaTTTTTTTTTT (433)2.30.0023
P8 GC+1d cultureTTTTTTTTTT (433)13.70.0137
P8 GC+1d cultureGAACAATGGA (3)12.60.0126
P8 GC+1d cultureTTCCAGATTG (5)10.30.0103
P8 GC+1d cultureCATCTAGTGA4.60.0046
P8 GC+1d cultureTATATAATGT (4)3.40.0034
P8 GC+1d cultureTTGTCATCTC (2)2.30.0023
P8 GC+1d cultureGCATCCTAAG (3)1.10.0011
P8 GC+SHH+1d cultureGAACAATGGA (3)18.70.0187
P8 GC+SHH+1d cultureTTTTTTTTTT (433)5.90.0059
P8 GC+SHH+1d cultureTTGTCATCTC (2)4.70.0047
P8 GC+SHH+1d cultureTTCCAGATTG (5)2.30.0023
P8 GC+SHH+1d cultureTAACTCTTTA (2)1.20.0012
P8 GC+SHH+1d cultureTTTAAAGAAA (9)1.20.0012
3T3 fibroblastsCATCTAGTGA3.50.0035
3T3 fibroblastsGAACAATGGA (3)3.50.0035
E15 cortexGAACAATGGA (3)19.80.0198
E15 cortexTTTTTTTTTT (433)4.90.0049
P1 cortexGAAACCAATG (8)4.50.0045
P1 cortexGAACAATGGA (3)4.50.0045
P1 cortexTTTAAAGAAA (9)4.50.0045
P1 cortexTTTTTTTTTT (433)4.50.0045
HypothalamusGAACAATGGA (3)14.50.0145
HypothalamusTGGAAAGCTT (4)9.10.0091
HypothalamusTTTTTTTTTT (433)7.20.0072
HypothalamusTTCCAGATTG (5)5.40.0054
HypothalamusTTGTCATCTC (2)3.60.0036
HypothalamusCATCTAGTGA1.80.0018
HypothalamusTTTACATTAT1.80.0018
E12.5 retinaGAACAATGGA (3)41.30.0413
E12.5 retinaTTTTTTTTTT (433)7.50.0075
E12.5 retinaTTGTCATCTC (2)1.90.0019
E12.5 retinaTTTAAAGAAA (9)1.90.0019
E14.5 retinaTTTTTTTTTT (433)23.70.0237
E14.5 retinaGAACAATGGA (3)12.80.0128
E14.5 retinaCATCTAGTGA3.60.0036
E14.5 retinaTTTAAAGAAA (9)3.60.0036
E14.5 retinaGCATCCTAAG (3)1.80.0018
E16.5 retinaGAACAATGGA (3)34.40.0344
E16.5 retinaTTCCAGATTG (5)14.50.0145
E16.5 retinaCATCTAGTGA5.40.0054
E16.5 retinaTTTTTTTTTT (433)5.40.0054
E16.5 retinaTTGTCATCTC (2)1.80.0018
E16.5 retinaTTTAAAGAAA (9)1.80.0018
E18.5 retinaGAACAATGGA (3)16.40.0164
E18.5 retinaTTTTTTTTTT (433)10.90.0109
E18.5 retinaCATCTAGTGA5.50.0055
E18.5 retinaGCTTTTGTTT (4)1.80.0018
E18.5 retinaTTCCAGATTG (5)1.80.0018
E18.5 retinaTTGTCATCTC (2)1.80.0018
P0.5 retinaGAACAATGGA (3)25.50.0255
P0.5 retinaTTTTTTTTTT (433)9.80.0098
P0.5 retinaTTGTCATCTC (2)3.90.0039
P0.5 retinaCATCTAGTGA20.002
P0.5 retinaGCATCCTAAG (3)20.002
P0.5 retinaTTCCAGATTG (5)20.002
P0.5 retinaTTTAAAGAAA (9)20.002
P2.5 retinaGAACAATGGA (3)8.80.0088
P2.5 retinaTTTTTTTTTT (433)70.007
P2.5 retinaTTCCAGATTG (5)3.50.0035
P2.5 retinaGCTTTTGTTT (4)1.80.0018
P2.5 retinaTAACTCTTTA (2)1.80.0018
P4.5 retinaGAACAATGGA (3)9.90.0099
P4.5 retinaTTTTTTTTTT (433)9.90.0099
P4.5 retinaCATCTAGTGA40.004
P4.5 retinaGAAACCAATG (8)20.002
P6.5 retinaGAACAATGGA (3)100.01
P6.5 retinaTTCCAGATTG (5)8.30.0083
P6.5 retinaTTTTTTTTTT (433)8.30.0083
P6.5 retinaCATCTAGTGA1.70.0017
P6.5 retinaTTGTCATCTC (2)1.70.0017
P6.5 retinaTTTACATTAT1.70.0017
P10.5 crx- retinaGAACAATGGA (3)24.20.0242
P10.5 crx- retinaTTCCAGATTG (5)5.60.0056
P10.5 crx- retinaCATCTAGTGA3.70.0037
P10.5 crx- retinaGGCTTTGGTT (3)1.90.0019
P10.5 crx- retinaTTTACATTAT1.90.0019
P10.5 crx+ retinaTTCCAGATTG (5)7.70.0077
P10.5 crx+ retinaGAACAATGGA (3)5.80.0058
P10.5 crx+ retinaCATCTAGTGA3.80.0038
P10.5 crx+ retinaGGCTTTGGTT (3)3.80.0038
P10.5 crx+ retinaTTTTTTTTTT (433)3.80.0038
P10.5 crx+ retinaGAAACCAATG (8)1.90.0019
P10.5 crx+ retinaGCATCCTAAG (3)1.90.0019
P10.5 crx+ retinaTTGTCATCTC (2)1.90.0019
Adult retinalTTTTTTTTTT (433)7.40.0074
Adult retinalGAACAATGGA (3)5.60.0056
Adult retinalCATCTAGTGA1.90.0019
Adult retinalTGGAAAGCTT (4)1.90.0019
Adult retinalTTTAAAGAAA (9)1.90.0019
ONLGAACAATGGA (3)3.80.0038
ONLTTTTTTTTTT (433)3.80.0038
ONLGCATCCTAAG (3)1.90.0019
ONLGCTTTTGTTT (4)1.90.0019
ONLGGCTTTGGTT (3)1.90.0019
ONLTTTAAAGAAA (9)1.90.0019