Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.4342
Tjp1
tight junction protein 1
7
7 28.5 cM
21872
Mm.4342
D130061D10Rik
RIKEN cDNA D130061D10 gene
7
319385
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAGAATG
(
2
)
GAAAAGACTG
(
5
)
6.5
0.0065
P8 GC+1d culture
TACATAATGC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TAACCAGCAG
(
2
)
TACATAATGC
(
2
)
3.5
0.0035
Hypothalamus
TACATAATGC
(
2
)
1.8
0.0018
E12.5 retina
GAAAAGAATG
(
2
)
1.9
0.0019
E14.5 retina
GAAAAGAATG
(
2
)
1.8
0.0018
E16.5 retina
GAAAAGAATG
(
2
)
GAAAAGACTG
(
5
)
TAACCAGCAG
(
2
)
9
0.009
E18.5 retina
GAAAAGAATG
(
2
)
1.8
0.0018
P0.5 retina
GAAAAGAATG
(
2
)
TAACCAGCAG
(
2
)
TACATAATGC
(
2
)
11.7
0.0117
P2.5 retina
TACATAATGC
(
2
)
1.8
0.0018
P4.5 retina
GAAAAGAATG
(
2
)
GAAAAGACTG
(
5
)
TACATAATGC
(
2
)
6
0.006
P6.5 retina
TACATAATGC
(
2
)
1.7
0.0017
P10.5 crx- retina
TACATAATGC
(
2
)
3.7
0.0037
P10.5 crx+ retina
GAAAAGAATG
(
2
)
TACATAATGC
(
2
)
5.7
0.0057
Adult retinal
GAAAAGACTG
(
5
)
TAACCAGCAG
(
2
)
TACATAATGC
(
2
)
7.5
0.0075
ONL
TAACCAGCAG
(
2
)
1.9
0.0019
