Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4419	Rpl5	ribosomal protein L5	5	5 58.5 cM	19983
Gene Ontology	5S rRNA binding | cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | rRNA binding | structural constituent of ribosome
Human Homolog	RPL5[ribosomal protein L5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTATCCG 88.1 0.0881 P8 Cb GC ATGTGCTTCC (2) 4.9 0.0049 P8 Cb GC GACAAGATCT 3.3 0.0033 P8 Cb GC AACCTTCAAA 1.6 0.0016 P8 Cb GC AGAAGAAGCC 1.6 0.0016 P8 Cb GC CGCTACCTAA 1.6 0.0016 P8 Cb GC TCTGGAGTTA 1.6 0.0016 P8 Cb GC TGCATATGCT 1.6 0.0016 Cb medulloblastoma CTGCTATCCG 30.1 0.0301 P8 GC+1d culture CTGCTATCCG 67.4 0.0674 P8 GC+1d culture TGCATATGCT 9.1 0.0091 P8 GC+1d culture ATGTGCTTCC (2) 3.4 0.0034 P8 GC+1d culture CGCTACCTAA 1.1 0.0011 P8 GC+1d culture GACAAGATCT 1.1 0.0011 P8 GC+1d culture TTGCTATCCG 1.1 0.0011 P8 GC+SHH+1d culture CTGCTATCCG 74.9 0.0749 P8 GC+SHH+1d culture TGCATATGCT 8.2 0.0082 P8 GC+SHH+1d culture ATGTGCTTCC (2) 4.7 0.0047 3T3 fibroblasts CTGCTATCCG 80.6 0.0806 3T3 fibroblasts TGCATATGCT 21 0.021 3T3 fibroblasts ATGTGCTTCC (2) 3.5 0.0035 3T3 fibroblasts TTGCTATCCG 3.5 0.0035 E15 cortex CTGCTATCCG 84.1 0.0841 E15 cortex TGCATATGCT 4.9 0.0049 E15 cortex TTGCTATCCG 4.9 0.0049 P1 cortex CTGCTATCCG 40.9 0.0409 P1 cortex TGCATATGCT 4.5 0.0045 Hypothalamus CTGCTATCCG 21.7 0.0217 Hypothalamus ATGTGCTTCC (2) 3.6 0.0036 Hypothalamus TCTGGAGTTA 3.6 0.0036 Hypothalamus TGCATATGCT 3.6 0.0036 E12.5 retina CTGCTATCCG 125.8 0.1258 E12.5 retina ATGTGCTTCC (2) 1.9 0.0019 E12.5 retina TGCATATGCT 1.9 0.0019 E14.5 retina CTGCTATCCG 58.3 0.0583 E14.5 retina TGCATATGCT 5.5 0.0055 E14.5 retina ATGTGCTTCC (2) 3.6 0.0036 E14.5 retina GACAAGATCT 3.6 0.0036 E14.5 retina CGCTACCTAA 1.8 0.0018 E14.5 retina TCTGGAGTTA 1.8 0.0018 E16.5 retina CTGCTATCCG 67 0.067 E16.5 retina ATGTGCTTCC (2) 9.1 0.0091 E16.5 retina TCTGGAGTTA 7.2 0.0072 E16.5 retina TGCATATGCT 5.4 0.0054 E16.5 retina AGAAGAAGCC 1.8 0.0018 E16.5 retina GACAAGATCT 1.8 0.0018 E18.5 retina CTGCTATCCG 60 0.06 E18.5 retina ATGTGCTTCC (2) 3.6 0.0036 E18.5 retina AACCTTCAAA 1.8 0.0018 E18.5 retina GACAAGATCT 1.8 0.0018 E18.5 retina TCTGGAGTTA 1.8 0.0018 E18.5 retina TGCATATGCT 1.8 0.0018 P0.5 retina CTGCTATCCG 111.9 0.1119 P0.5 retina TGCATATGCT 5.9 0.0059 P0.5 retina ATGTGCTTCC (2) 2 0.002 P2.5 retina CTGCTATCCG 45.8 0.0458 P2.5 retina ATGTGCTTCC (2) 3.5 0.0035 P2.5 retina TCTGGAGTTA 1.8 0.0018 P2.5 retina TGCATATGCT 1.8 0.0018 P4.5 retina CTGCTATCCG 43.6 0.0436 P4.5 retina ATGTGCTTCC (2) 2 0.002 P6.5 retina CTGCTATCCG 41.7 0.0417 P6.5 retina TGCATATGCT 3.3 0.0033 P10.5 crx- retina CTGCTATCCG 48.3 0.0483 P10.5 crx- retina ATGTGCTTCC (2) 1.9 0.0019 P10.5 crx- retina TGCATATGCT 1.9 0.0019 P10.5 crx+ retina CTGCTATCCG 23.1 0.0231 P10.5 crx+ retina TGCATATGCT 7.7 0.0077 P10.5 crx+ retina AGAAGAAGCC 1.9 0.0019 P10.5 crx+ retina TTGCTATCCG 1.9 0.0019 Adult retinal CTGCTATCCG 29.6 0.0296 Adult retinal ATGTGCTTCC (2) 1.9 0.0019 ONL CTGCTATCCG 17.2 0.0172 ONL CGCTACCTAA 1.9 0.0019