| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGGGAACTG GGGAAAAAAA (5) GTTTCAAGAG (3)
| 4.8 | 0.0048 |
| Cb medulloblastoma | CACATTGTCT CTGTCCTTGT GGGAAAAAAA (5) GTTTCAAGAG (3)
| 101.7 | 0.1017 |
| P8 GC+1d culture | CTGGGAACTG GGGAAAAAAA (5) GTTTCAAGAG (3)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | GGGAAAAAAA (5) GGGGGAAAAA (3) GTTTCAAGAG (3)
| 5.8 | 0.0058 |
| 3T3 fibroblasts | CTGGGAACTG GTTTCAAGAG (3)
| 7 | 0.007 |
| E15 cortex | GGGGGAAAAA (3) GTTTCAAGAG (3)
| 14.8 | 0.0148 |
| P1 cortex | GGGAAAAAAA (5) GGGGGAAAAA (3) GTTTCAAGAG (3)
| 31.7 | 0.0317 |
| Hypothalamus | CCCCCGCCCG CTGGGAACTG CTGTCCTTGT GGGAAAAAAA (5) GGGGGAAAAA (3) TACCACGCAC (2)
| 52.5 | 0.0525 |
| E14.5 retina | CTGGGAACTG GGGAAAAAAA (5)
| 5.4 | 0.0054 |
| E16.5 retina | GGGAAAAAAA (5) TACCACGCAC (2)
| 5.4 | 0.0054 |
| E18.5 retina | CACATTGTCT CTGGGAACTG GGGAAAAAAA (5) GGGGGAAAAA (3)
| 7.2 | 0.0072 |
| P0.5 retina | GGGAAAAAAA (5) GTTTCAAGAG (3)
| 13.7 | 0.0137 |
| P2.5 retina | GGGAAAAAAA (5) GGGGGAAAAA (3)
| 8.8 | 0.0088 |
| P4.5 retina | CACATTGTCT GGGAAAAAAA (5)
| 11.9 | 0.0119 |
| P6.5 retina | CACATTGTCT CTGGGAACTG GGGAAAAAAA (5)
| 23.4 | 0.0234 |
| P10.5 crx- retina | GGGAAAAAAA (5) GTTTCAAGAG (3)
| 14.8 | 0.0148 |
| P10.5 crx+ retina | CCCCCGCCCG CTGGGAACTG GGGAAAAAAA (5) GTTTCAAGAG (3)
| 28.8 | 0.0288 |
| Adult retinal | CCCCCGCCCG CTGTCCTTGT GGGAAAAAAA (5) GTTTCAAGAG (3)
| 44.5 | 0.0445 |
| ONL | GGGAAAAAAA (5) GTTTCAAGAG (3)
| 32.5 | 0.0325 |