Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45124	Kitl	kit ligand	10	10 D1 (10 57.0 cM)	17311
Gene Ontology	cell adhesion | extracellular space | germ-cell development | growth factor activity | integral to membrane | integral to membrane | membrane | plasma membrane | protein binding | stem cell factor receptor binding
Human Homolog	KITLG[KIT ligand]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 34.2 0.0342 Cb medulloblastoma AGATGGCTTT CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 73.9 0.0739 P8 GC+1d culture CCTGCAACCA TAATTTCAAA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 35.3 0.0353 P8 GC+SHH+1d culture AGATGGCTTT CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 37.5 0.0375 3T3 fibroblasts AGATGGCTTT CCTGCAACCA TGCTTTGAAA (2) 21 0.021 E15 cortex CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) 14.7 0.0147 P1 cortex CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 40.9 0.0409 Hypothalamus AGATGGCTTT CCTGCAACCA GTAGTGTATG TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 112.2 0.1122 E12.5 retina CCTGCAACCA TATGTTTTGA (2) TCTTAATGAA TGTTCAGTCC 58.3 0.0583 E14.5 retina CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 32.7 0.0327 E16.5 retina TATGTTTTGA (2) TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 39.8 0.0398 E18.5 retina TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 49.1 0.0491 P0.5 retina AGATGGCTTT CCTGCAACCA TCTTAATGAA 43.2 0.0432 P2.5 retina CCTGCAACCA GTAGTGTATG TCTTAATGAA TGCTTTGAAA (2) 49.4 0.0494 P4.5 retina CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 51.5 0.0515 P6.5 retina CCTGCAACCA TAATTTCAAA TATGTTTTGA (2) TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 55 0.055 P10.5 crx- retina CCTGCAACCA GTAGTGTATG TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 44.7 0.0447 P10.5 crx+ retina CCTGCAACCA TCTTAATGAA TGCTTTGAAA (2) TGTTCAGTCC 53.8 0.0538 Adult retinal CCTGCAACCA TCTTAATGAA 26 0.026 ONL TCTTAATGAA 32.6 0.0326