Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45141	Cpsf1	cleavage and polyadenylation specific factor 1	15		94230
Gene Ontology	mRNA processing | nucleic acid binding | nucleus | RNA binding
Human Homolog	CPSF1[cleavage and polyadenylation specific factor 1, 160kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTACACATA (5) 13.1 0.0131 P8 Cb GC ATCACTGTGC (3) 3.3 0.0033 P8 Cb GC GAGCGCAGTG (5) 3.3 0.0033 P8 Cb GC AAGACAGTGT (2) 1.6 0.0016 P8 Cb GC GTGCTGAGGT (4) 1.6 0.0016 Cb medulloblastoma TCTACACATA (5) 13.9 0.0139 Cb medulloblastoma AAGACAGTGT (2) 9.2 0.0092 Cb medulloblastoma GAGCGCAGTG (5) 4.6 0.0046 Cb medulloblastoma GCCACACTGC (4) 4.6 0.0046 P8 GC+1d culture TCTACACATA (5) 9.1 0.0091 P8 GC+1d culture GAGCGCAGTG (5) 8 0.008 P8 GC+1d culture GTGGACAATG (4) 5.7 0.0057 P8 GC+1d culture AAGACAGTGT (2) 1.1 0.0011 P8 GC+1d culture GCCACACTGC (4) 1.1 0.0011 P8 GC+SHH+1d culture GAGCGCAGTG (5) 10.5 0.0105 P8 GC+SHH+1d culture TCTACACATA (5) 8.2 0.0082 P8 GC+SHH+1d culture GCCACACTGC (4) 3.5 0.0035 P8 GC+SHH+1d culture AAGACAGTGT (2) 1.2 0.0012 3T3 fibroblasts GAGCGCAGTG (5) 10.5 0.0105 3T3 fibroblasts ATCACTGTGC (3) 3.5 0.0035 E15 cortex GTGCTGAGGT (4) 4.9 0.0049 P1 cortex TCTACACATA (5) 13.6 0.0136 P1 cortex GAGCGCAGTG (5) 9.1 0.0091 P1 cortex GTGGACAATG (4) 9.1 0.0091 P1 cortex GCCACACTGC (4) 4.5 0.0045 Hypothalamus TCTACACATA (5) 18.1 0.0181 Hypothalamus GAGCGCAGTG (5) 3.6 0.0036 Hypothalamus GCCACACTGC (4) 1.8 0.0018 Hypothalamus GTGCTGAGGT (4) 1.8 0.0018 E12.5 retina GAGCGCAGTG (5) 15 0.015 E12.5 retina GCCACACTGC (4) 5.6 0.0056 E12.5 retina AAGACAGTGT (2) 3.8 0.0038 E12.5 retina TCTACACATA (5) 3.8 0.0038 E12.5 retina GTGGACAATG (4) 1.9 0.0019 E14.5 retina GAGCGCAGTG (5) 9.1 0.0091 E14.5 retina GCCACACTGC (4) 3.6 0.0036 E14.5 retina AAGACAGTGT (2) 1.8 0.0018 E14.5 retina TCTACACATA (5) 1.8 0.0018 E16.5 retina GAGCGCAGTG (5) 7.2 0.0072 E16.5 retina GCCACACTGC (4) 5.4 0.0054 E16.5 retina AAGACAGTGT (2) 1.8 0.0018 E16.5 retina TCTACACATA (5) 1.8 0.0018 E18.5 retina GAGCGCAGTG (5) 5.5 0.0055 E18.5 retina GCCACACTGC (4) 3.6 0.0036 E18.5 retina AAGACAGTGT (2) 1.8 0.0018 E18.5 retina TCTACACATA (5) 1.8 0.0018 P0.5 retina GAGCGCAGTG (5) 11.8 0.0118 P0.5 retina GCCACACTGC (4) 3.9 0.0039 P0.5 retina TCTACACATA (5) 3.9 0.0039 P0.5 retina AAGACAGTGT (2) 2 0.002 P0.5 retina GTGGACAATG (4) 2 0.002 P2.5 retina GAGCGCAGTG (5) 14.1 0.0141 P2.5 retina TCTACACATA (5) 5.3 0.0053 P2.5 retina GCCACACTGC (4) 3.5 0.0035 P2.5 retina AAGACAGTGT (2) 1.8 0.0018 P4.5 retina GAGCGCAGTG (5) 9.9 0.0099 P4.5 retina TCTACACATA (5) 7.9 0.0079 P4.5 retina GCCACACTGC (4) 2 0.002 P6.5 retina TCTACACATA (5) 6.7 0.0067 P6.5 retina GAGCGCAGTG (5) 5 0.005 P6.5 retina GCCACACTGC (4) 1.7 0.0017 P10.5 crx- retina GAGCGCAGTG (5) 20.4 0.0204 P10.5 crx- retina TCTACACATA (5) 13 0.013 P10.5 crx- retina AAGACAGTGT (2) 1.9 0.0019 P10.5 crx- retina GTGGACAATG (4) 1.9 0.0019 P10.5 crx+ retina GAGCGCAGTG (5) 5.8 0.0058 P10.5 crx+ retina GCCACACTGC (4) 1.9 0.0019 P10.5 crx+ retina GTGGACAATG (4) 1.9 0.0019 P10.5 crx+ retina TCTACACATA (5) 1.9 0.0019 Adult retinal TCTACACATA (5) 7.4 0.0074 Adult retinal GAGCGCAGTG (5) 5.6 0.0056 Adult retinal GCCACACTGC (4) 1.9 0.0019 Adult retinal GTGGACAATG (4) 1.9 0.0019 ONL GAGCGCAGTG (5) 11.5 0.0115 ONL TCTACACATA (5) 3.8 0.0038 ONL AAGACAGTGT (2) 1.9 0.0019 ONL GCCACACTGC (4) 1.9 0.0019