Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45141	Cpsf1	cleavage and polyadenylation specific factor 1	15		94230
Gene Ontology	mRNA processing | nucleic acid binding | nucleus | RNA binding
Human Homolog	CPSF1[cleavage and polyadenylation specific factor 1, 160kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACAGTGT ATCACTGTGC GAGCGCAGTG GTGCTGAGGT TCTACACATA 22.9 0.0229 Cb medulloblastoma AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 32.3 0.0323 P8 GC+1d culture AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 25 0.025 P8 GC+SHH+1d culture AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 23.4 0.0234 3T3 fibroblasts ATCACTGTGC GAGCGCAGTG 14 0.014 E15 cortex GTGCTGAGGT 4.9 0.0049 P1 cortex GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 36.3 0.0363 Hypothalamus GAGCGCAGTG GCCACACTGC (2) GTGCTGAGGT TCTACACATA 25.3 0.0253 E12.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 30.1 0.0301 E14.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 16.3 0.0163 E16.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 16.2 0.0162 E18.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 12.7 0.0127 P0.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 23.6 0.0236 P2.5 retina AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 24.7 0.0247 P4.5 retina GAGCGCAGTG GCCACACTGC (2) TCTACACATA 19.8 0.0198 P6.5 retina GAGCGCAGTG GCCACACTGC (2) TCTACACATA 13.4 0.0134 P10.5 crx- retina AAGACAGTGT GAGCGCAGTG GTGGACAATG TCTACACATA 37.2 0.0372 P10.5 crx+ retina GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 11.5 0.0115 Adult retinal GAGCGCAGTG GCCACACTGC (2) GTGGACAATG TCTACACATA 16.8 0.0168 ONL AAGACAGTGT GAGCGCAGTG GCCACACTGC (2) TCTACACATA 19.1 0.0191