Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4550	Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	1	1 86.8 cM	11931
Gene Ontology	basolateral plasma membrane | integral to membrane | membrane | plasma membrane | potassium ion transport | sodium ion transport | sodium/potassium-exchanging ATPase activity | sodium/potassium-exchanging ATPase complex
Human Homolog	ATP1B1[ATPase, Na+/K+ transporting, beta 1 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC TTCTAGCATA (4) 4.9 0.0049 P8 Cb GC AAAAAAAGAA (15) 1.6 0.0016 P8 Cb GC ACAGCCCACC (2) 1.6 0.0016 P8 Cb GC CCACTCATCC (3) 1.6 0.0016 P8 Cb GC GATTTGCACT (2) 1.6 0.0016 P8 Cb GC GCTGCCTGGC (6) 1.6 0.0016 P8 Cb GC GTACTTTTAA (2) 1.6 0.0016 P8 Cb GC GTACTTTTTA (2) 1.6 0.0016 P8 Cb GC GTACTTTTTC (2) 1.6 0.0016 P8 Cb GC TTGTGGTGAC (26) 1.6 0.0016 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma TTCTAGCATA (4) 53.2 0.0532 Cb medulloblastoma ACAGCCCACC (2) 27.7 0.0277 Cb medulloblastoma GTGGAAGAAT (7) 16.2 0.0162 Cb medulloblastoma GATTTGCACT (2) 13.9 0.0139 Cb medulloblastoma GTACTTTTTC (2) 13.9 0.0139 Cb medulloblastoma GTACTTTTAA (2) 9.2 0.0092 Cb medulloblastoma ATGCCTCCAG 6.9 0.0069 Cb medulloblastoma TTGTGGTGAC (26) 6.9 0.0069 Cb medulloblastoma GTACTTTTTA (2) 4.6 0.0046 Cb medulloblastoma AAAAAAAGAA (15) 2.3 0.0023 Cb medulloblastoma ATTTTCGAGG 2.3 0.0023 Cb medulloblastoma CCACTCATCC (3) 2.3 0.0023 Cb medulloblastoma GCTGCCTGGC (6) 2.3 0.0023 Cb medulloblastoma GCTTGAAAAA (3) 2.3 0.0023 Cb medulloblastoma GGGGAAATGG (9) 2.3 0.0023 Cb medulloblastoma GGGGAACTGC (3) 2.3 0.0023 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture TTGTGGTGAC (26) 9.1 0.0091 P8 GC+1d culture ACAGCCCACC (2) 5.7 0.0057 P8 GC+1d culture TTCTAGCATA (4) 5.7 0.0057 P8 GC+1d culture GATTTGCACT (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAGAA (15) 1.1 0.0011 P8 GC+1d culture GCTGCCTGGC (6) 1.1 0.0011 P8 GC+1d culture GTACTTTTAA (2) 1.1 0.0011 P8 GC+1d culture GTACTTTTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture TTGTGGTGAC (26) 5.9 0.0059 P8 GC+SHH+1d culture GATTTGCACT (2) 4.7 0.0047 P8 GC+SHH+1d culture TTCTAGCATA (4) 4.7 0.0047 P8 GC+SHH+1d culture ACAGCCCACC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCCTGGC (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGGAAGAAT (7) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTCGAGG 1.2 0.0012 P8 GC+SHH+1d culture GTACTTTTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTACTTTTTC (2) 1.2 0.0012 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex GATTTGCACT (2) 14.8 0.0148 E15 cortex CCACTCATCC (3) 9.9 0.0099 E15 cortex TTGTGGTGAC (26) 4.9 0.0049 P1 cortex TTCTAGCATA (4) 63.6 0.0636 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex GATTTGCACT (2) 9.1 0.0091 P1 cortex ACAGCCCACC (2) 4.5 0.0045 P1 cortex ATGCCTCCAG 4.5 0.0045 P1 cortex GGGGAAATGG (9) 4.5 0.0045 P1 cortex TTGTGGTGAC (26) 4.5 0.0045 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus TTCTAGCATA (4) 58 0.058 Hypothalamus ACAGCCCACC (2) 27.2 0.0272 Hypothalamus ATGCCTCCAG 18.1 0.0181 Hypothalamus GATTTGCACT (2) 14.5 0.0145 Hypothalamus GTACTTTTTC (2) 12.7 0.0127 Hypothalamus ATTTTCGAGG 7.2 0.0072 Hypothalamus GTGGAAGAAT (7) 7.2 0.0072 Hypothalamus TTGTGGTGAC (26) 7.2 0.0072 Hypothalamus CGCTGGTGCT 3.6 0.0036 Hypothalamus TTTTAGCATA 3.6 0.0036 Hypothalamus AAAAAAAGAA (15) 1.8 0.0018 Hypothalamus GCTGCCTGGC (6) 1.8 0.0018 Hypothalamus GCTTGAAAAA (3) 1.8 0.0018 Hypothalamus GGGGAACTGC (3) 1.8 0.0018 Hypothalamus GTACTTTTAA (2) 1.8 0.0018 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina TTGTGGTGAC (26) 3.8 0.0038 E12.5 retina AAAAAAAGAA (15) 1.9 0.0019 E12.5 retina ACAGCCCACC (2) 1.9 0.0019 E12.5 retina CCACTCATCC (3) 1.9 0.0019 E12.5 retina GATTTGCACT (2) 1.9 0.0019 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina GATTTGCACT (2) 9.1 0.0091 E14.5 retina TTGTGGTGAC (26) 7.3 0.0073 E14.5 retina CCACTCATCC (3) 5.5 0.0055 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina TTGTGGTGAC (26) 14.5 0.0145 E16.5 retina GATTTGCACT (2) 7.2 0.0072 E16.5 retina CCACTCATCC (3) 3.6 0.0036 E16.5 retina ACAGCCCACC (2) 1.8 0.0018 E16.5 retina GCTTGAAAAA (3) 1.8 0.0018 E16.5 retina GTACTTTTAA (2) 1.8 0.0018 E16.5 retina GTACTTTTTA (2) 1.8 0.0018 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina TTGTGGTGAC (26) 9.1 0.0091 E18.5 retina GATTTGCACT (2) 5.5 0.0055 E18.5 retina CCACTCATCC (3) 3.6 0.0036 E18.5 retina GTGGAAGAAT (7) 3.6 0.0036 E18.5 retina ATGCCTCCAG 1.8 0.0018 E18.5 retina GTACTTTTTA (2) 1.8 0.0018 E18.5 retina TTCTAGCATA (4) 1.8 0.0018 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina GATTTGCACT (2) 11.8 0.0118 P0.5 retina TTGTGGTGAC (26) 7.9 0.0079 P0.5 retina TTCTAGCATA (4) 2 0.002 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina TTGTGGTGAC (26) 14.1 0.0141 P2.5 retina AAAAAAAGAA (15) 7 0.007 P2.5 retina CCACTCATCC (3) 7 0.007 P2.5 retina TTCTAGCATA (4) 7 0.007 P2.5 retina ACAGCCCACC (2) 1.8 0.0018 P2.5 retina GGGGAAATGG (9) 1.8 0.0018 P2.5 retina GTGGAAGAAT (7) 1.8 0.0018 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina TTGTGGTGAC (26) 19.8 0.0198 P4.5 retina ACAGCCCACC (2) 7.9 0.0079 P4.5 retina TTCTAGCATA (4) 7.9 0.0079 P4.5 retina GATTTGCACT (2) 4 0.004 P4.5 retina TTTTAGCATA 4 0.004 P4.5 retina CCACTCATCC (3) 2 0.002 P4.5 retina GCTGCCTGGC (6) 2 0.002 P4.5 retina GTACTTTTTC (2) 2 0.002 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina CCACTCATCC (3) 11.7 0.0117 P6.5 retina TTCTAGCATA (4) 11.7 0.0117 P6.5 retina TTGTGGTGAC (26) 11.7 0.0117 P6.5 retina ACAGCCCACC (2) 5 0.005 P6.5 retina ATGCCTCCAG 1.7 0.0017 P6.5 retina ATTTTCGAGG 1.7 0.0017 P6.5 retina GCTGCCTGGC (6) 1.7 0.0017 P6.5 retina GTACTTTTTC (2) 1.7 0.0017 P6.5 retina GTGGAAGAAT (7) 1.7 0.0017 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina TTCTAGCATA (4) 24.2 0.0242 P10.5 crx- retina GATTTGCACT (2) 9.3 0.0093 P10.5 crx- retina TTGTGGTGAC (26) 9.3 0.0093 P10.5 crx- retina GGGGAACTGC (3) 7.4 0.0074 P10.5 crx- retina ATGCCTCCAG 5.6 0.0056 P10.5 crx- retina CCACTCATCC (3) 3.7 0.0037 P10.5 crx- retina CGCTGGTGCT 3.7 0.0037 P10.5 crx- retina ACAGCCCACC (2) 1.9 0.0019 P10.5 crx- retina ATTTTCGAGG 1.9 0.0019 P10.5 crx- retina GGGGAAATGG (9) 1.9 0.0019 P10.5 crx- retina GTACTTTTTC (2) 1.9 0.0019 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina TTGTGGTGAC (26) 23.1 0.0231 P10.5 crx+ retina TTCTAGCATA (4) 21.1 0.0211 P10.5 crx+ retina ACAGCCCACC (2) 19.2 0.0192 P10.5 crx+ retina GATTTGCACT (2) 9.6 0.0096 P10.5 crx+ retina CCACTCATCC (3) 7.7 0.0077 P10.5 crx+ retina GTACTTTTTC (2) 5.8 0.0058 P10.5 crx+ retina ATGCCTCCAG 3.8 0.0038 P10.5 crx+ retina GTGGAAGAAT (7) 3.8 0.0038 P10.5 crx+ retina GCTGCCTGGC (6) 1.9 0.0019 Adult retinal TTCTAGCATA (4) 33.3 0.0333 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal TTGTGGTGAC (26) 7.4 0.0074 Adult retinal CCACTCATCC (3) 5.6 0.0056 Adult retinal AAAAAAAGAA (15) 3.7 0.0037 Adult retinal ACAGCCCACC (2) 3.7 0.0037 Adult retinal ATGCCTCCAG 3.7 0.0037 Adult retinal GTACTTTTTC (2) 3.7 0.0037 Adult retinal GATTTGCACT (2) 1.9 0.0019 Adult retinal GTGGAAGAAT (7) 1.9 0.0019 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL TTCTAGCATA (4) 7.7 0.0077 ONL TTGTGGTGAC (26) 5.7 0.0057 ONL GATTTGCACT (2) 3.8 0.0038 ONL AAAAAAAGAA (15) 1.9 0.0019 ONL CCACTCATCC (3) 1.9 0.0019 ONL GCTGCCTGGC (6) 1.9 0.0019 ONL GCTTGAAAAA (3) 1.9 0.0019