Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4550	Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	1	1 86.8 cM	11931
Gene Ontology	basolateral plasma membrane | integral to membrane | membrane | plasma membrane | potassium ion transport | sodium ion transport | sodium/potassium-exchanging ATPase activity | sodium/potassium-exchanging ATPase complex
Human Homolog	ATP1B1[ATPase, Na+/K+ transporting, beta 1 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTAGCATA (4) 4.9 0.0049 P8 Cb GC ACAGCCCACC (2) 1.6 0.0016 P8 Cb GC GATTTGCACT (2) 1.6 0.0016 P8 Cb GC GTACTTTTAA 1.6 0.0016 P8 Cb GC GTACTTTTTC 1.6 0.0016 Cb medulloblastoma TTCTAGCATA (4) 53.2 0.0532 Cb medulloblastoma ACAGCCCACC (2) 27.7 0.0277 Cb medulloblastoma GTGGAAGAAT (2) 16.2 0.0162 Cb medulloblastoma GATTTGCACT (2) 13.9 0.0139 Cb medulloblastoma GTACTTTTTC 13.9 0.0139 Cb medulloblastoma GTACTTTTAA 9.2 0.0092 Cb medulloblastoma ATGCCTCCAG 6.9 0.0069 Cb medulloblastoma ATTTTCGAGG 2.3 0.0023 Cb medulloblastoma GCTTGAAAAA (3) 2.3 0.0023 Cb medulloblastoma GGGGAACTGC (2) 2.3 0.0023 P8 GC+1d culture ACAGCCCACC (2) 5.7 0.0057 P8 GC+1d culture TTCTAGCATA (4) 5.7 0.0057 P8 GC+1d culture GATTTGCACT (2) 2.3 0.0023 P8 GC+1d culture GTACTTTTAA 1.1 0.0011 P8 GC+1d culture GTACTTTTTC 1.1 0.0011 P8 GC+SHH+1d culture GATTTGCACT (2) 4.7 0.0047 P8 GC+SHH+1d culture TTCTAGCATA (4) 4.7 0.0047 P8 GC+SHH+1d culture ACAGCCCACC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGGAAGAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTCGAGG 1.2 0.0012 P8 GC+SHH+1d culture GTACTTTTAA 1.2 0.0012 P8 GC+SHH+1d culture GTACTTTTTC 1.2 0.0012 E15 cortex GATTTGCACT (2) 14.8 0.0148 P1 cortex TTCTAGCATA (4) 63.6 0.0636 P1 cortex GATTTGCACT (2) 9.1 0.0091 P1 cortex ACAGCCCACC (2) 4.5 0.0045 P1 cortex ATGCCTCCAG 4.5 0.0045 Hypothalamus TTCTAGCATA (4) 58 0.058 Hypothalamus ACAGCCCACC (2) 27.2 0.0272 Hypothalamus ATGCCTCCAG 18.1 0.0181 Hypothalamus GATTTGCACT (2) 14.5 0.0145 Hypothalamus GTACTTTTTC 12.7 0.0127 Hypothalamus ATTTTCGAGG 7.2 0.0072 Hypothalamus GTGGAAGAAT (2) 7.2 0.0072 Hypothalamus CGCTGGTGCT 3.6 0.0036 Hypothalamus TTTTAGCATA 3.6 0.0036 Hypothalamus GCTTGAAAAA (3) 1.8 0.0018 Hypothalamus GGGGAACTGC (2) 1.8 0.0018 Hypothalamus GTACTTTTAA 1.8 0.0018 E12.5 retina ACAGCCCACC (2) 1.9 0.0019 E12.5 retina GATTTGCACT (2) 1.9 0.0019 E14.5 retina GATTTGCACT (2) 9.1 0.0091 E16.5 retina GATTTGCACT (2) 7.2 0.0072 E16.5 retina ACAGCCCACC (2) 1.8 0.0018 E16.5 retina GCTTGAAAAA (3) 1.8 0.0018 E16.5 retina GTACTTTTAA 1.8 0.0018 E18.5 retina GATTTGCACT (2) 5.5 0.0055 E18.5 retina GTGGAAGAAT (2) 3.6 0.0036 E18.5 retina ATGCCTCCAG 1.8 0.0018 E18.5 retina TTCTAGCATA (4) 1.8 0.0018 P0.5 retina GATTTGCACT (2) 11.8 0.0118 P0.5 retina TTCTAGCATA (4) 2 0.002 P2.5 retina TTCTAGCATA (4) 7 0.007 P2.5 retina ACAGCCCACC (2) 1.8 0.0018 P2.5 retina GTGGAAGAAT (2) 1.8 0.0018 P4.5 retina ACAGCCCACC (2) 7.9 0.0079 P4.5 retina TTCTAGCATA (4) 7.9 0.0079 P4.5 retina GATTTGCACT (2) 4 0.004 P4.5 retina TTTTAGCATA 4 0.004 P4.5 retina GTACTTTTTC 2 0.002 P6.5 retina TTCTAGCATA (4) 11.7 0.0117 P6.5 retina ACAGCCCACC (2) 5 0.005 P6.5 retina ATGCCTCCAG 1.7 0.0017 P6.5 retina ATTTTCGAGG 1.7 0.0017 P6.5 retina GTACTTTTTC 1.7 0.0017 P6.5 retina GTGGAAGAAT (2) 1.7 0.0017 P10.5 crx- retina TTCTAGCATA (4) 24.2 0.0242 P10.5 crx- retina GATTTGCACT (2) 9.3 0.0093 P10.5 crx- retina GGGGAACTGC (2) 7.4 0.0074 P10.5 crx- retina ATGCCTCCAG 5.6 0.0056 P10.5 crx- retina CGCTGGTGCT 3.7 0.0037 P10.5 crx- retina ACAGCCCACC (2) 1.9 0.0019 P10.5 crx- retina ATTTTCGAGG 1.9 0.0019 P10.5 crx- retina GTACTTTTTC 1.9 0.0019 P10.5 crx+ retina TTCTAGCATA (4) 21.1 0.0211 P10.5 crx+ retina ACAGCCCACC (2) 19.2 0.0192 P10.5 crx+ retina GATTTGCACT (2) 9.6 0.0096 P10.5 crx+ retina GTACTTTTTC 5.8 0.0058 P10.5 crx+ retina ATGCCTCCAG 3.8 0.0038 P10.5 crx+ retina GTGGAAGAAT (2) 3.8 0.0038 Adult retinal TTCTAGCATA (4) 33.3 0.0333 Adult retinal ACAGCCCACC (2) 3.7 0.0037 Adult retinal ATGCCTCCAG 3.7 0.0037 Adult retinal GTACTTTTTC 3.7 0.0037 Adult retinal GATTTGCACT (2) 1.9 0.0019 Adult retinal GTGGAAGAAT (2) 1.9 0.0019 ONL TTCTAGCATA (4) 7.7 0.0077 ONL GATTTGCACT (2) 3.8 0.0038 ONL GCTTGAAAAA (3) 1.9 0.0019