Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45602	Brd8	bromodomain containing 8	18		78656
Mm.45602	4432404P07Rik	RIKEN cDNA 4432404P07 gene	18		70787
Gene Ontology	receptor activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAACTGAGT (5) 32.6 0.0326 P8 Cb GC GGTTTTGTTA (3) 6.5 0.0065 P8 Cb GC GGCTCTGTTA (2) 4.9 0.0049 P8 Cb GC CAGACTGTGG (3) 1.6 0.0016 P8 Cb GC TAGGCCAAAC (2) 1.6 0.0016 P8 Cb GC TATGTGTGCA (3) 1.6 0.0016 Cb medulloblastoma ATAACTGAGT (5) 23.1 0.0231 Cb medulloblastoma GGCTCTGTTA (2) 4.6 0.0046 Cb medulloblastoma TATGTGTGCA (3) 2.3 0.0023 P8 GC+1d culture ATAACTGAGT (5) 18.3 0.0183 P8 GC+1d culture GGCTCTGTTA (2) 4.6 0.0046 P8 GC+1d culture GGTTTTGTTA (3) 1.1 0.0011 P8 GC+1d culture TAGGCCAAAC (2) 1.1 0.0011 P8 GC+1d culture TGTGCTCCCA (2) 1.1 0.0011 P8 GC+SHH+1d culture ATAACTGAGT (5) 21.1 0.0211 P8 GC+SHH+1d culture GGCTCTGTTA (2) 4.7 0.0047 P8 GC+SHH+1d culture GGTTTTGTTA (3) 2.3 0.0023 E15 cortex ATAACTGAGT (5) 14.8 0.0148 E15 cortex GGCTCTGTTA (2) 9.9 0.0099 E15 cortex GGTTTTGTTA (3) 4.9 0.0049 P1 cortex ATAACTGAGT (5) 9.1 0.0091 P1 cortex GGTTTTGTTA (3) 4.5 0.0045 P1 cortex TATGTGTGCA (3) 4.5 0.0045 Hypothalamus ATAACTGAGT (5) 7.2 0.0072 Hypothalamus TATGTGTGCA (3) 3.6 0.0036 Hypothalamus CAGACTGTGG (3) 1.8 0.0018 Hypothalamus GGCTCTGTTA (2) 1.8 0.0018 Hypothalamus TAGGCCAAAC (2) 1.8 0.0018 Hypothalamus TGTGCTCCCA (2) 1.8 0.0018 E12.5 retina ATAACTGAGT (5) 13.1 0.0131 E12.5 retina GGCTCTGTTA (2) 11.3 0.0113 E12.5 retina GGTTTTGTTA (3) 3.8 0.0038 E12.5 retina TATGTGTGCA (3) 3.8 0.0038 E12.5 retina TAGGCCAAAC (2) 1.9 0.0019 E12.5 retina TGTGCTCCCA (2) 1.9 0.0019 E14.5 retina ATAACTGAGT (5) 18.2 0.0182 E14.5 retina GGCTCTGTTA (2) 3.6 0.0036 E14.5 retina TATGTGTGCA (3) 1.8 0.0018 E16.5 retina ATAACTGAGT (5) 16.3 0.0163 E16.5 retina GGCTCTGTTA (2) 9.1 0.0091 E16.5 retina TATGTGTGCA (3) 1.8 0.0018 E16.5 retina TCATTTGGCC (2) 1.8 0.0018 E18.5 retina ATAACTGAGT (5) 9.1 0.0091 E18.5 retina GGCTCTGTTA (2) 1.8 0.0018 E18.5 retina TAGGCCAAAC (2) 1.8 0.0018 E18.5 retina TATGTGTGCA (3) 1.8 0.0018 P0.5 retina ATAACTGAGT (5) 11.8 0.0118 P0.5 retina GGCTCTGTTA (2) 3.9 0.0039 P0.5 retina GGTTTTGTTA (3) 3.9 0.0039 P0.5 retina TATGTGTGCA (3) 3.9 0.0039 P0.5 retina TAGGCCAAAC (2) 2 0.002 P2.5 retina ATAACTGAGT (5) 21.1 0.0211 P2.5 retina TAGGCCAAAC (2) 5.3 0.0053 P2.5 retina GGCTCTGTTA (2) 3.5 0.0035 P2.5 retina TATGTGTGCA (3) 3.5 0.0035 P2.5 retina GGTTTTGTTA (3) 1.8 0.0018 P4.5 retina ATAACTGAGT (5) 15.9 0.0159 P4.5 retina GGCTCTGTTA (2) 5.9 0.0059 P4.5 retina TCATTTGGCC (2) 4 0.004 P4.5 retina TATGTGTGCA (3) 2 0.002 P6.5 retina ATAACTGAGT (5) 13.3 0.0133 P6.5 retina GGCTCTGTTA (2) 8.3 0.0083 P10.5 crx- retina ATAACTGAGT (5) 9.3 0.0093 P10.5 crx- retina GGTTTTGTTA (3) 7.4 0.0074 P10.5 crx- retina GGCTCTGTTA (2) 5.6 0.0056 P10.5 crx- retina CAGACTGTGG (3) 1.9 0.0019 P10.5 crx- retina TATGTGTGCA (3) 1.9 0.0019 P10.5 crx+ retina ATAACTGAGT (5) 13.5 0.0135 P10.5 crx+ retina GGCTCTGTTA (2) 1.9 0.0019 P10.5 crx+ retina GGTTTTGTTA (3) 1.9 0.0019 P10.5 crx+ retina TAGGCCAAAC (2) 1.9 0.0019 P10.5 crx+ retina TATGTGTGCA (3) 1.9 0.0019 P10.5 crx+ retina TGTGCTCCCA (2) 1.9 0.0019 Adult retinal ATAACTGAGT (5) 7.4 0.0074 Adult retinal TATGTGTGCA (3) 1.9 0.0019 ONL ATAACTGAGT (5) 3.8 0.0038 ONL GGCTCTGTTA (2) 1.9 0.0019 ONL GGTTTTGTTA (3) 1.9 0.0019 ONL TAGGCCAAAC (2) 1.9 0.0019